Cluster: Rep_2195_CGC58
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2195_c_38 | Rep_2195_c_38_1 | 61 | 2220 | - | GH112 |
| CAZyme | Rep_2195_c_38 | Rep_2195_c_38_2 | 2237 | 3613 | - | CE12 |
| CAZyme | Rep_2195_c_38 | Rep_2195_c_38_3 | 3615 | 4667 | - | GH105 |
| NULL(UNKNOWN) | Rep_2195_c_38 | Rep_2195_c_38_4 | 4875 | 6602 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2195_c_38 | Rep_2195_c_38_5 | 6681 | 7607 | - | 3.A.1.1.29 |
| TC | Rep_2195_c_38 | Rep_2195_c_38_6 | 7621 | 8571 | - | 3.A.1.1.29 |
Gene ID: Rep_2195_c_38_1
Type: CAZyme
Location: 61 - 2220 (-)
Type: CAZyme
Location: 61 - 2220 (-)
Gene ID: Rep_2195_c_38_2
Type: CAZyme
Location: 2237 - 3613 (-)
Type: CAZyme
Location: 2237 - 3613 (-)
Gene ID: Rep_2195_c_38_3
Type: CAZyme
Location: 3615 - 4667 (-)
Type: CAZyme
Location: 3615 - 4667 (-)
Gene ID: Rep_2195_c_38_4
Type:
Location: 4875 - 6602 (-)
Type:
Location: 4875 - 6602 (-)
Gene ID: Rep_2195_c_38_5
Type: TC
Location: 6681 - 7607 (-)
Type: TC
Location: 6681 - 7607 (-)
Gene ID: Rep_2195_c_38_6
Type: TC
Location: 7621 - 8571 (-)
Type: TC
Location: 7621 - 8571 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.