PROTEIN: Rep_2195_c_38_4
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Protein File & Metadata
Source:
Rep_2195_c_38_4.pdb
Genome ID:
Protein ID:
Rep_2195_c_38_4
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Protein Sequence
MKKNTLQKTI ALALTGAMAM GTLAGCGSSS DTSASTSTDT KTEAASTEAA ATTAASTEAS 60 DEVVGIDGYE AFADNVTLRI PVYDRGVEGV PDVSNNYWTK WVQENFGDKY NVTVEYVPIT 120 RSDVLTSYAL LAAGDELPTI LMEYDYPKLA QWAGDGYLTT YDLDEFAKVA PTYYQRMVDL 180 DQISYTQMDG ETYFALAERP YYNTNYTFIT FYRQDWLDQI GYSEYPTTWA EEKEMLQKLV 240 DEGICKNPLG GQMVTGAGVD QNYAYRSYPL DEENWACYGD YAIPALGDAA NKALLKRVNE 300 QYNAGFINPE YYVTDAETAK AAFINGESVQ WGAYISASMD VLDSFYVQNP DAKLAVKIQA 360 TTDDPEGGTV PAYRANNPFG MMIGFSSQAS EDEIKAAWMY MEWMTQEDNL FTMQWGIEGE 420 NYTMGDDGLP VAVTDYSGDC TQGFNNSKDY WCVTTEARTA GTIEDVIKAA APAGYPQDFT 480 QDIIDNYYKQ VEVADKGWAV SDCNFAVVLD SVGEYQASLL ELYTEYRDQL TMCSPDEFDA 540 LYDELAQKYA DAGYQAIVDE RKEAYEAGQS TKLPQ 575
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 20 | 570 | 13 | 502 | 0.7169 |
0.7984 |
| AF-Q8DNU8-F1-model_v4 | 71 | 561 | 36 | 440 | 0.6262 |
0.7794 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 68 | 570 | 41 | 506 | 0.6951 |
0.8139 |
| AF-A0A1Q2TKJ3-F1-model_v4 | GH49 | 7 | 561 | 198 | 797 | 0.4888 |
0.5937 |
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 71 | 568 | 25 | 744 | 0.4826 |
0.6277 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 68 | 570 | 41 | 506 | 0.6951 |
0.8139 |
| A0A1Q2TKJ3 | GH49 | 7 | 561 | 198 | 797 | 0.4888 |
0.5937 |
| A0A7U1BNH7 | GH10 | 71 | 568 | 25 | 744 | 0.4826 |
0.6277 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fth-assembly1.cif.gz_A | 71 | 575 | 1 | 496 | 0.7124 |
0.781 |
| 5xs8-assembly1.cif.gz_A | 75 | 571 | 1 | 474 | 0.7104 |
0.7943 |
| 3omb-assembly1.cif.gz_A | 71 | 572 | 4 | 503 | 0.7088 |
0.7756 |
| 6jhx-assembly2.cif.gz_B | 66 | 572 | 2 | 483 | 0.6973 |
0.7761 |
| 5h6u-assembly1.cif.gz_A | 66 | 575 | 1 | 487 | 0.6963 |
0.7711 |
| 4tqu-assembly1.cif.gz_Q | 66 | 575 | 2 | 492 | 0.696 |
0.7688 |
| 3vlw-assembly2.cif.gz_B | 66 | 575 | 1 | 489 | 0.694 |
0.7673 |
| 5g5y-assembly1.cif.gz_A | 70 | 575 | 1 | 494 | 0.69 |
0.7597 |
| 5g62-assembly2.cif.gz_B | 75 | 575 | 1 | 491 | 0.6815 |
0.7532 |
| 5suo-assembly1.cif.gz_A | 75 | 575 | 1 | 451 | 0.6721 |
0.7686 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37966-F1-model_v4 | 70 | 569 | 30 | 502 | 0.7277 |
0.8358 |
| AF-Q8FVS7-F1-model_v4 | 72 | 560 | 21 | 411 | 0.6465 |
0.8019 |
| AF-Q578M8-F1-model_v4 | 72 | 560 | 21 | 411 | 0.6458 |
0.8011 |
| AF-Q2YKZ9-F1-model_v4 | 72 | 560 | 21 | 411 | 0.6451 |
0.8002 |
| AF-D4GP35-F1-model_v4 | 24 | 560 | 21 | 459 | 0.5663 |
0.6708 |
| AF-Q9V297-F1-model_v4 | 67 | 560 | 71 | 453 | 0.5575 |
0.7364 |