Cluster: Rep_2185_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2185
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2185_c_0 | Rep_2185_c_0_817 | 845072 | 846385 | + | 2.A.86.1.8 |
| STP | Rep_2185_c_0 | Rep_2185_c_0_818 | 846395 | 849100 | + | TPR_2 |
| CAZyme | Rep_2185_c_0 | Rep_2185_c_0_819 | 849122 | 851080 | + | CBM48 | GH13_9 |
| pfam | Rep_2185_c_0 | Rep_2185_c_0_820 | 851345 | 854485 | + | DUF6240 | DUF6240 |
| pfam | Rep_2185_c_0 | Rep_2185_c_0_821 | 854442 | 855164 | - | Amidase_3 |
| CAZyme | Rep_2185_c_0 | Rep_2185_c_0_822 | 855316 | 857049 | - | GH18 |
Gene ID: Rep_2185_c_0_817
Type: TC
Location: 845072 - 846385 (+)
Type: TC
Location: 845072 - 846385 (+)
Gene ID: Rep_2185_c_0_818
Type: STP
Location: 846395 - 849100 (+)
Type: STP
Location: 846395 - 849100 (+)
Gene ID: Rep_2185_c_0_819
Type: CAZyme
Location: 849122 - 851080 (+)
Type: CAZyme
Location: 849122 - 851080 (+)
Gene ID: Rep_2185_c_0_820
Type: pfam
Location: 851345 - 854485 (+)
Type: pfam
Location: 851345 - 854485 (+)
Gene ID: Rep_2185_c_0_821
Type: pfam
Location: 854442 - 855164 (-)
Type: pfam
Location: 854442 - 855164 (-)
Gene ID: Rep_2185_c_0_822
Type: CAZyme
Location: 855316 - 857049 (-)
Type: CAZyme
Location: 855316 - 857049 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter rectalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.