Cluster: Rep_2185_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2185
- CGC Family ID: CGCFAM_04034
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2185_c_0 | Rep_2185_c_0_376 | 421870 | 422961 | + | GT2 |
| pfam | Rep_2185_c_0 | Rep_2185_c_0_377 | 423106 | 424446 | + | AcetylCoA_hydro | AcetylCoA_hyd_C |
| pfam | Rep_2185_c_0 | Rep_2185_c_0_378 | 424551 | 425804 | - | DHHA1 | tRNA_SAD |
| TC | Rep_2185_c_0 | Rep_2185_c_0_379 | 425886 | 427925 | - | 3.A.1.134.4 |
| TC | Rep_2185_c_0 | Rep_2185_c_0_380 | 427918 | 428685 | - | 3.A.1.134.4 |
Gene ID: Rep_2185_c_0_376
Type: CAZyme
Location: 421870 - 422961 (+)
Type: CAZyme
Location: 421870 - 422961 (+)
Gene ID: Rep_2185_c_0_377
Type: pfam
Location: 423106 - 424446 (+)
Type: pfam
Location: 423106 - 424446 (+)
Gene ID: Rep_2185_c_0_378
Type: pfam
Location: 424551 - 425804 (-)
Type: pfam
Location: 424551 - 425804 (-)
Gene ID: Rep_2185_c_0_379
Type: TC
Location: 425886 - 427925 (-)
Type: TC
Location: 425886 - 427925 (-)
Gene ID: Rep_2185_c_0_380
Type: TC
Location: 427918 - 428685 (-)
Type: TC
Location: 427918 - 428685 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter rectalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.