Cluster: Rep_2185_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2185
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2185_c_0 | Rep_2185_c_0_160 | 185758 | 187227 | - | 4.A.1.1.7 |
| TC | Rep_2185_c_0 | Rep_2185_c_0_161 | 187311 | 187790 | - | 4.A.1.2.11 |
| CAZyme | Rep_2185_c_0 | Rep_2185_c_0_162 | 187784 | 188938 | - | CE9 |
Gene ID: Rep_2185_c_0_160
Type: TC
Location: 185758 - 187227 (-)
Type: TC
Location: 185758 - 187227 (-)
Gene ID: Rep_2185_c_0_161
Type: TC
Location: 187311 - 187790 (-)
Type: TC
Location: 187311 - 187790 (-)
Gene ID: Rep_2185_c_0_162
Type: CAZyme
Location: 187784 - 188938 (-)
Type: CAZyme
Location: 187784 - 188938 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter rectalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.