Cluster: Rep_2185_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2185
- CGC Family ID: CGCFAM_00334
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2185_c_0 | Rep_2185_c_0_2768 | 2927617 | 2928981 | - | 2.A.2.3.3 |
| TF | Rep_2185_c_0 | Rep_2185_c_0_2769 | 2929241 | 2930098 | + | HTH_AraC | HTH_AraC |
| pfam | Rep_2185_c_0 | Rep_2185_c_0_2770 | 2930162 | 2931109 | - | Bgal_small_N |
| CAZyme | Rep_2185_c_0 | Rep_2185_c_0_2771 | 2931093 | 2932994 | - | GH2 |
Gene ID: Rep_2185_c_0_2768
Type: TC
Location: 2927617 - 2928981 (-)
Type: TC
Location: 2927617 - 2928981 (-)
Gene ID: Rep_2185_c_0_2769
Type: TF
Location: 2929241 - 2930098 (+)
Type: TF
Location: 2929241 - 2930098 (+)
Gene ID: Rep_2185_c_0_2770
Type: pfam
Location: 2930162 - 2931109 (-)
Type: pfam
Location: 2930162 - 2931109 (-)
Gene ID: Rep_2185_c_0_2771
Type: CAZyme
Location: 2931093 - 2932994 (-)
Type: CAZyme
Location: 2931093 - 2932994 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter rectalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.