Cluster: Rep_2185_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2185
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2185_c_0 | Rep_2185_c_0_2527 | 2688934 | 2690709 | - | CBM34 | GH13_20 |
| pfam | Rep_2185_c_0 | Rep_2185_c_0_2528 | 2691288 | 2692391 | + | Chorismate_synt |
| NULL(UNKNOWN) | Rep_2185_c_0 | Rep_2185_c_0_2529 | 2692499 | 2694604 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2185_c_0 | Rep_2185_c_0_2530 | 2694607 | 2695470 | - | 3.A.1.148.3 |
Gene ID: Rep_2185_c_0_2527
Type: CAZyme
Location: 2688934 - 2690709 (-)
Type: CAZyme
Location: 2688934 - 2690709 (-)
Gene ID: Rep_2185_c_0_2528
Type: pfam
Location: 2691288 - 2692391 (+)
Type: pfam
Location: 2691288 - 2692391 (+)
Gene ID: Rep_2185_c_0_2529
Type:
Location: 2692499 - 2694604 (-)
Type:
Location: 2692499 - 2694604 (-)
Gene ID: Rep_2185_c_0_2530
Type: TC
Location: 2694607 - 2695470 (-)
Type: TC
Location: 2694607 - 2695470 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter rectalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.