Cluster: Rep_2185_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2185
- CGC Family ID: CGCFAM_03410
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2185_c_0 | Rep_2185_c_0_2356 | 2500481 | 2501596 | + | CE1 |
| peptidase | Rep_2185_c_0 | Rep_2185_c_0_2357 | 2501630 | 2502613 | + | S09.UPW |
| pfam | Rep_2185_c_0 | Rep_2185_c_0_2358 | 2502603 | 2503442 | + | Lactamase_B |
| TC | Rep_2185_c_0 | Rep_2185_c_0_2359 | 2503462 | 2504838 | + | 2.A.2.3.3 |
Gene ID: Rep_2185_c_0_2356
Type: CAZyme
Location: 2500481 - 2501596 (+)
Type: CAZyme
Location: 2500481 - 2501596 (+)
Gene ID: Rep_2185_c_0_2357
Type: peptidase
Location: 2501630 - 2502613 (+)
Type: peptidase
Location: 2501630 - 2502613 (+)
Gene ID: Rep_2185_c_0_2358
Type: pfam
Location: 2502603 - 2503442 (+)
Type: pfam
Location: 2502603 - 2503442 (+)
Gene ID: Rep_2185_c_0_2359
Type: TC
Location: 2503462 - 2504838 (+)
Type: TC
Location: 2503462 - 2504838 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter rectalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.