Cluster: Rep_2185_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2185
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2185_c_0 | Rep_2185_c_0_1916 | 2028748 | 2030736 | - | GH42 |
| TF | Rep_2185_c_0 | Rep_2185_c_0_1917 | 2030978 | 2031973 | + | LacI |
| TC | Rep_2185_c_0 | Rep_2185_c_0_1918 | 2032039 | 2033001 | - | 9.B.146.1.3 |
Gene ID: Rep_2185_c_0_1916
Type: CAZyme
Location: 2028748 - 2030736 (-)
Type: CAZyme
Location: 2028748 - 2030736 (-)
Gene ID: Rep_2185_c_0_1917
Type: TF
Location: 2030978 - 2031973 (+)
Type: TF
Location: 2030978 - 2031973 (+)
Gene ID: Rep_2185_c_0_1918
Type: TC
Location: 2032039 - 2033001 (-)
Type: TC
Location: 2032039 - 2033001 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter rectalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.