Cluster: Rep_2185_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2185
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2185_c_0 | Rep_2185_c_0_1707 | 1785822 | 1788179 | + | 2.A.6.4.2 |
| pfam | Rep_2185_c_0 | Rep_2185_c_0_1708 | 1788305 | 1788574 | + | DUF1294 |
| CAZyme | Rep_2185_c_0 | Rep_2185_c_0_1709 | 1788711 | 1790015 | + | GH13_20 |
Gene ID: Rep_2185_c_0_1707
Type: TC
Location: 1785822 - 1788179 (+)
Type: TC
Location: 1785822 - 1788179 (+)
Gene ID: Rep_2185_c_0_1708
Type: pfam
Location: 1788305 - 1788574 (+)
Type: pfam
Location: 1788305 - 1788574 (+)
Gene ID: Rep_2185_c_0_1709
Type: CAZyme
Location: 1788711 - 1790015 (+)
Type: CAZyme
Location: 1788711 - 1790015 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter rectalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.