Cluster: Rep_2185_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2185
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2185_c_0 | Rep_2185_c_0_1429 | 1492100 | 1494748 | + | 3.A.3.5.15 |
| CAZyme | Rep_2185_c_0 | Rep_2185_c_0_1430 | 1494770 | 1495930 | + | GH5_2 |
| pfam | Rep_2185_c_0 | Rep_2185_c_0_1431 | 1495996 | 1496268 | - | SpoIIID |
| TC | Rep_2185_c_0 | Rep_2185_c_0_1432 | 1496408 | 1496995 | - | 2.A.115.2.14 |
Gene ID: Rep_2185_c_0_1429
Type: TC
Location: 1492100 - 1494748 (+)
Type: TC
Location: 1492100 - 1494748 (+)
Gene ID: Rep_2185_c_0_1430
Type: CAZyme
Location: 1494770 - 1495930 (+)
Type: CAZyme
Location: 1494770 - 1495930 (+)
Gene ID: Rep_2185_c_0_1431
Type: pfam
Location: 1495996 - 1496268 (-)
Type: pfam
Location: 1495996 - 1496268 (-)
Gene ID: Rep_2185_c_0_1432
Type: TC
Location: 1496408 - 1496995 (-)
Type: TC
Location: 1496408 - 1496995 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter rectalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.