Cluster: Rep_2185_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2185
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2185_c_0 | Rep_2185_c_0_841 | 872622 | 873236 | + | 9.B.104.1.3 |
| pfam | Rep_2185_c_0 | Rep_2185_c_0_842 | 873260 | 874249 | + | SCP2 |
| pfam | Rep_2185_c_0 | Rep_2185_c_0_843 | 874305 | 874721 | + | HIT | DcpS_C |
| CAZyme | Rep_2185_c_0 | Rep_2185_c_0_844 | 874839 | 875915 | - | GT28 |
Gene ID: Rep_2185_c_0_841
Type: TC
Location: 872622 - 873236 (+)
Type: TC
Location: 872622 - 873236 (+)
Gene ID: Rep_2185_c_0_842
Type: pfam
Location: 873260 - 874249 (+)
Type: pfam
Location: 873260 - 874249 (+)
Gene ID: Rep_2185_c_0_843
Type: pfam
Location: 874305 - 874721 (+)
Type: pfam
Location: 874305 - 874721 (+)
Gene ID: Rep_2185_c_0_844
Type: CAZyme
Location: 874839 - 875915 (-)
Type: CAZyme
Location: 874839 - 875915 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter rectalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2185_c_0_841 | vegetarian > vegan | 1.06742 | 0.00557 |