Cluster: Rep_2178_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2178
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2178_c_11 | Rep_2178_c_11_42 | 42163 | 44592 | + | GH2 |
| pfam | Rep_2178_c_11 | Rep_2178_c_11_43 | 44601 | 46076 | + | DUF6937 | DUF6938 |
| TC | Rep_2178_c_11 | Rep_2178_c_11_44 | 46107 | 47498 | + | 2.A.2.1.1 |
| CAZyme | Rep_2178_c_11 | Rep_2178_c_11_45 | 47506 | 49926 | + | GH36 |
Gene ID: Rep_2178_c_11_42
Type: CAZyme
Location: 42163 - 44592 (+)
Type: CAZyme
Location: 42163 - 44592 (+)
Gene ID: Rep_2178_c_11_43
Type: pfam
Location: 44601 - 46076 (+)
Type: pfam
Location: 44601 - 46076 (+)
Gene ID: Rep_2178_c_11_44
Type: TC
Location: 46107 - 47498 (+)
Type: TC
Location: 46107 - 47498 (+)
Gene ID: Rep_2178_c_11_45
Type: CAZyme
Location: 47506 - 49926 (+)
Type: CAZyme
Location: 47506 - 49926 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900550935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.