Cluster: Rep_2178_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2178
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2178_c_9 | Rep_2178_c_9_50 | 48122 | 49864 | + | 3.A.1.106.3 |
| TC | Rep_2178_c_9 | Rep_2178_c_9_51 | 49885 | 51675 | + | 3.A.1.106.3 |
| CAZyme | Rep_2178_c_9 | Rep_2178_c_9_52 | 52385 | 54346 | + | GH13_14 |
Gene ID: Rep_2178_c_9_50
Type: TC
Location: 48122 - 49864 (+)
Type: TC
Location: 48122 - 49864 (+)
Gene ID: Rep_2178_c_9_51
Type: TC
Location: 49885 - 51675 (+)
Type: TC
Location: 49885 - 51675 (+)
Gene ID: Rep_2178_c_9_52
Type: CAZyme
Location: 52385 - 54346 (+)
Type: CAZyme
Location: 52385 - 54346 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900550935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.