Cluster: Rep_2178_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2178
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2178_c_7 | Rep_2178_c_7_30 | 44500 | 45432 | + | GT2 |
| pfam | Rep_2178_c_7 | Rep_2178_c_7_31 | 45425 | 45850 | + | GtrA_DPMS_TM |
| pfam | Rep_2178_c_7 | Rep_2178_c_7_32 | 45847 | 47433 | + | Glucos_trans_II |
| TC | Rep_2178_c_7 | Rep_2178_c_7_33 | 47444 | 48487 | + | 9.B.97.1.2 |
Gene ID: Rep_2178_c_7_30
Type: CAZyme
Location: 44500 - 45432 (+)
Type: CAZyme
Location: 44500 - 45432 (+)
Gene ID: Rep_2178_c_7_31
Type: pfam
Location: 45425 - 45850 (+)
Type: pfam
Location: 45425 - 45850 (+)
Gene ID: Rep_2178_c_7_32
Type: pfam
Location: 45847 - 47433 (+)
Type: pfam
Location: 45847 - 47433 (+)
Gene ID: Rep_2178_c_7_33
Type: TC
Location: 47444 - 48487 (+)
Type: TC
Location: 47444 - 48487 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900550935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.