Cluster: Rep_2178_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2178
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2178_c_7 | Rep_2178_c_7_21 | 34644 | 36398 | + | 3.A.1.106.15 |
| CAZyme | Rep_2178_c_7 | Rep_2178_c_7_22 | 36421 | 37251 | + | GT23 |
| CAZyme | Rep_2178_c_7 | Rep_2178_c_7_23 | 37262 | 37987 | + | GT26 |
Gene ID: Rep_2178_c_7_21
Type: TC
Location: 34644 - 36398 (+)
Type: TC
Location: 34644 - 36398 (+)
Gene ID: Rep_2178_c_7_22
Type: CAZyme
Location: 36421 - 37251 (+)
Type: CAZyme
Location: 36421 - 37251 (+)
Gene ID: Rep_2178_c_7_23
Type: CAZyme
Location: 37262 - 37987 (+)
Type: CAZyme
Location: 37262 - 37987 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900550935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.