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Cluster: Rep_2178_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2178_c_4 Rep_2178_c_4_115 132152 132883 + 3.A.1.103.5
NULL(UNKNOWN) Rep_2178_c_4 Rep_2178_c_4_116 132864 134858 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_2178_c_4 Rep_2178_c_4_117 134872 136230 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2178_c_4 Rep_2178_c_4_118 136333 140073 + GH73
TC Rep_2178_c_4 Rep_2178_c_4_119 140093 141970 + 9.B.18.2.1
TC Rep_2178_c_4 Rep_2178_c_4_120 141985 142614 + 9.B.18.1.3
CAZyme Rep_2178_c_4 Rep_2178_c_4_121 142676 144736 + GT4
CAZyme Rep_2178_c_4 Rep_2178_c_4_122 144759 145562 + GT2
CAZyme Rep_2178_c_4 Rep_2178_c_4_123 145570 146478 + GT2
CAZyme Rep_2178_c_4 Rep_2178_c_4_124 146475 147845 + GT4
TC Rep_2178_c_4 Rep_2178_c_4_125 147930 148706 + 3.A.1.103.4
TC Rep_2178_c_4 Rep_2178_c_4_126 148766 150058 + 3.A.1.103.4
pfam Rep_2178_c_4 Rep_2178_c_4_127 150068 150736 + CTP_transf_3
CAZyme Rep_2178_c_4 Rep_2178_c_4_128 150764 152431 + GT99
CAZyme Rep_2178_c_4 Rep_2178_c_4_129 152444 155071 + GT2
NULL(UNKNOWN) Rep_2178_c_4 Rep_2178_c_4_130 155106 156596 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2178_c_4 Rep_2178_c_4_131 156611 157561 + GT2
TC Rep_2178_c_4 Rep_2178_c_4_132 157564 158502 + 8.A.5.1.6
pfam Rep_2178_c_4 Rep_2178_c_4_133 158514 159305 + AP_endonuc_2
pfam Rep_2178_c_4 Rep_2178_c_4_134 159307 160434 + DAO
CAZyme Rep_2178_c_4 Rep_2178_c_4_135 160427 161359 + GT2
Gene ID: Rep_2178_c_4_115
Type: TC
Location: 132152 - 132883 (+)
Gene ID: Rep_2178_c_4_116
Type:
Location: 132864 - 134858 (+)
Gene ID: Rep_2178_c_4_117
Type:
Location: 134872 - 136230 (+)
Gene ID: Rep_2178_c_4_118
Type: CAZyme
Location: 136333 - 140073 (+)
Gene ID: Rep_2178_c_4_119
Type: TC
Location: 140093 - 141970 (+)
Gene ID: Rep_2178_c_4_120
Type: TC
Location: 141985 - 142614 (+)
Gene ID: Rep_2178_c_4_121
Type: CAZyme
Location: 142676 - 144736 (+)
Gene ID: Rep_2178_c_4_122
Type: CAZyme
Location: 144759 - 145562 (+)
Gene ID: Rep_2178_c_4_123
Type: CAZyme
Location: 145570 - 146478 (+)
Gene ID: Rep_2178_c_4_124
Type: CAZyme
Location: 146475 - 147845 (+)
Gene ID: Rep_2178_c_4_125
Type: TC
Location: 147930 - 148706 (+)
Gene ID: Rep_2178_c_4_126
Type: TC
Location: 148766 - 150058 (+)
Gene ID: Rep_2178_c_4_127
Type: pfam
Location: 150068 - 150736 (+)
Gene ID: Rep_2178_c_4_128
Type: CAZyme
Location: 150764 - 152431 (+)
Gene ID: Rep_2178_c_4_129
Type: CAZyme
Location: 152444 - 155071 (+)
Gene ID: Rep_2178_c_4_130
Type:
Location: 155106 - 156596 (+)
Gene ID: Rep_2178_c_4_131
Type: CAZyme
Location: 156611 - 157561 (+)
Gene ID: Rep_2178_c_4_132
Type: TC
Location: 157564 - 158502 (+)
Gene ID: Rep_2178_c_4_133
Type: pfam
Location: 158514 - 159305 (+)
Gene ID: Rep_2178_c_4_134
Type: pfam
Location: 159307 - 160434 (+)
Gene ID: Rep_2178_c_4_135
Type: CAZyme
Location: 160427 - 161359 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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