Cluster: Rep_2126_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2126
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2126_c_5 | Rep_2126_c_5_45 | 55324 | 56280 | + | 3.A.1.1.29 |
| TC | Rep_2126_c_5 | Rep_2126_c_5_46 | 56291 | 57169 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | Rep_2126_c_5 | Rep_2126_c_5_47 | 57204 | 58832 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2126_c_5 | Rep_2126_c_5_48 | 58836 | 60161 | + | GH30_1 |
| CAZyme | Rep_2126_c_5 | Rep_2126_c_5_49 | 60232 | 62997 | + | GH3 |
| CAZyme | Rep_2126_c_5 | Rep_2126_c_5_50 | 63071 | 64855 | + | GH2 |
| TC | Rep_2126_c_5 | Rep_2126_c_5_51 | 64967 | 66364 | + | 2.A.66.1.33 |
Gene ID: Rep_2126_c_5_45
Type: TC
Location: 55324 - 56280 (+)
Type: TC
Location: 55324 - 56280 (+)
Gene ID: Rep_2126_c_5_46
Type: TC
Location: 56291 - 57169 (+)
Type: TC
Location: 56291 - 57169 (+)
Gene ID: Rep_2126_c_5_47
Type:
Location: 57204 - 58832 (+)
Type:
Location: 57204 - 58832 (+)
Gene ID: Rep_2126_c_5_48
Type: CAZyme
Location: 58836 - 60161 (+)
Type: CAZyme
Location: 58836 - 60161 (+)
Gene ID: Rep_2126_c_5_49
Type: CAZyme
Location: 60232 - 62997 (+)
Type: CAZyme
Location: 60232 - 62997 (+)
Gene ID: Rep_2126_c_5_50
Type: CAZyme
Location: 63071 - 64855 (+)
Type: CAZyme
Location: 63071 - 64855 (+)
Gene ID: Rep_2126_c_5_51
Type: TC
Location: 64967 - 66364 (+)
Type: TC
Location: 64967 - 66364 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Marvinbryantia
Species
Marvinbryantia sp900550755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.