PROTEIN: Rep_2126_c_5_47
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Protein File & Metadata
Source:
Rep_2126_c_5_47.pdb
Genome ID:
Protein ID:
Rep_2126_c_5_47
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Protein Sequence
MRKNKKYAAM LAGTLAAAAV LTGCGGGGSP SQKSGEIPEL TEDRYTLDEN TPAWQLDKKE 60 NTELTWYVNA DWWNTDWGND VVTRKIKEDL KLDVKFITGD DTKLNTFFAG GEMPDIITIL 120 DASSSAANSA AKWALPLNEL AEKYDPYFFE VAAPDTLNWF RLDDGNTYGY PDYSNGQADY 180 DSGALKASTA FAIRKDVYEE LGEPEMGTPE QFLDVLGQIK EKYPDLIPFG SNSMTDSAGS 240 LEADLQNFLG VPVENEDGTW YDRDMDEDYL TWINVLSQAY RKGYISDDNF SDDGTSHEDK 300 IKAGKYACVF IGGTPQRSGP LQVWRSGHPD AEYIAIDGPQ STLGRKPTLN QAGLSGWMIN 360 YITKDCKDPI KAIELFTYLI SPEGGILCKY GVEGETYEIN SEGLYELLPE VKEMQLNDND 420 AFKKTYRLSE FIVFGHDRYD YLSADKPEAT LQMQEWGEGK LKSQFVIENI KPDQGTAEAR 480 SLSAITTNWY TTLTSLIRSK DDTEFNQILE DHKKFREDNN FDAIVKIYNE KMAKNREKLE 540 GK 542
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 21 | 542 | 23 | 502 | 0.7281 |
0.8063 |
| AF-A0A133D019-F1-model_v4 | 12 | 542 | 15 | 485 | 0.6602 |
0.7353 |
| AF-K0EWS9-F1-model_v4 | 36 | 527 | 41 | 463 | 0.6015 |
0.7202 |
| AF-K0F002-F1-model_v4 | 33 | 527 | 39 | 439 | 0.5978 |
0.7321 |
| AF-K0F1Y0-F1-model_v4 | 33 | 528 | 40 | 433 | 0.5872 |
0.7256 |
| AF-Q8DRJ6-F1-model_v4 | 15 | 542 | 37 | 514 | 0.5833 |
0.6609 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 29 | 542 | 31 | 506 | 0.7044 |
0.7902 |
| AF-A0A1Q2TKJ3-F1-model_v4 | GH49 | 1 | 528 | 25 | 797 | 0.4966 |
0.6125 |
| A0A9Q8PNJ5 | GH4 | 1 | 527 | 256 | 866 | 0.4844 |
0.6164 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 29 | 542 | 31 | 506 | 0.7044 |
0.7902 |
| A0A1Q2TKJ3 | GH49 | 1 | 528 | 25 | 797 | 0.4966 |
0.6125 |
| A0A9Q8PNJ5 | GH4 | 1 | 527 | 256 | 866 | 0.4844 |
0.6164 |
| UJP10085.1 | GH154 | 11 | 498 | 493 | 1168 | 0.3449 |
0.5446 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fth-assembly1.cif.gz_A | 59 | 540 | 1 | 496 | 0.7575 |
0.8285 |
| 3omb-assembly1.cif.gz_A | 28 | 537 | 1 | 503 | 0.7538 |
0.7977 |
| 5xs8-assembly1.cif.gz_A | 61 | 532 | 1 | 474 | 0.7454 |
0.8154 |
| 5g5y-assembly1.cif.gz_A | 59 | 541 | 1 | 494 | 0.7377 |
0.8065 |
| 6jhx-assembly2.cif.gz_B | 53 | 537 | 2 | 483 | 0.7224 |
0.7844 |
| 4tqu-assembly1.cif.gz_Q | 53 | 540 | 2 | 490 | 0.7213 |
0.781 |
| 5h6u-assembly1.cif.gz_A | 54 | 542 | 1 | 487 | 0.7213 |
0.779 |
| 3vlw-assembly2.cif.gz_B | 53 | 540 | 1 | 489 | 0.7207 |
0.7785 |
| 5g62-assembly2.cif.gz_B | 62 | 541 | 1 | 491 | 0.7156 |
0.7851 |
| 5suo-assembly1.cif.gz_A | 61 | 542 | 1 | 451 | 0.6817 |
0.7624 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 20 | 541 | 19 | 538 | 0.7403 |
0.7869 |
| AF-P37966-F1-model_v4 | 41 | 537 | 28 | 502 | 0.7272 |
0.8125 |
| AF-Q795R2-F1-model_v4 | 16 | 537 | 8 | 498 | 0.7179 |
0.7763 |
| AF-Q8FVS7-F1-model_v4 | 59 | 527 | 22 | 411 | 0.6312 |
0.7676 |
| AF-Q578M8-F1-model_v4 | 28 | 527 | 17 | 411 | 0.6308 |
0.7583 |
| AF-Q2YKZ9-F1-model_v4 | 60 | 527 | 22 | 411 | 0.6296 |
0.7658 |
| AF-O50499-F1-model_v4 | 1 | 536 | 1 | 469 | 0.6176 |
0.6849 |
| AF-O31518-F1-model_v4 | 44 | 527 | 26 | 427 | 0.6114 |
0.7382 |
| AF-Q55471-F1-model_v4 | 25 | 527 | 17 | 421 | 0.6088 |
0.7262 |
| AF-A0QXD9-F1-model_v4 | 15 | 527 | 36 | 477 | 0.6043 |
0.7069 |