Cluster: Rep_2080_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2080
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2080_c_3 | Rep_2080_c_3_54 | 31922 | 34201 | + | GH36 |
| pfam | Rep_2080_c_3 | Rep_2080_c_3_55 | 34380 | 35369 | + | GMP_synt_C | NAD_synthase | tRNA_Me_trans |
| TC | Rep_2080_c_3 | Rep_2080_c_3_56 | 35497 | 36831 | + | 2.A.66.1.33 |
Gene ID: Rep_2080_c_3_54
Type: CAZyme
Location: 31922 - 34201 (+)
Type: CAZyme
Location: 31922 - 34201 (+)
Gene ID: Rep_2080_c_3_55
Type: pfam
Location: 34380 - 35369 (+)
Type: pfam
Location: 34380 - 35369 (+)
Gene ID: Rep_2080_c_3_56
Type: TC
Location: 35497 - 36831 (+)
Type: TC
Location: 35497 - 36831 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp003478355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.