dbCAN Logo

Cluster: Rep_2080_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2080_c_26 Rep_2080_c_26_475 458685 459413 + 3.A.1.1.45
NULL(UNKNOWN) Rep_2080_c_26 Rep_2080_c_26_476 459355 459585 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2080_c_26 Rep_2080_c_26_477 459712 460596 + 3.A.1.1.7
TC Rep_2080_c_26 Rep_2080_c_26_478 460596 461468 + 3.A.1.1.45
TF Rep_2080_c_26 Rep_2080_c_26_479 461499 461927 + LacI
STP Rep_2080_c_26 Rep_2080_c_26_480 461890 462474 + Peripla_BP_3
CAZyme Rep_2080_c_26 Rep_2080_c_26_481 462471 463919 + GH13_18
peptidase Rep_2080_c_26 Rep_2080_c_26_482 463944 465467 + S12.UPW
CAZyme Rep_2080_c_26 Rep_2080_c_26_483 465508 467334 + GH13_4
Gene ID: Rep_2080_c_26_475
Type: TC
Location: 458685 - 459413 (+)
Gene ID: Rep_2080_c_26_476
Type:
Location: 459355 - 459585 (+)
Gene ID: Rep_2080_c_26_477
Type: TC
Location: 459712 - 460596 (+)
Gene ID: Rep_2080_c_26_478
Type: TC
Location: 460596 - 461468 (+)
Gene ID: Rep_2080_c_26_479
Type: TF
Location: 461499 - 461927 (+)
Gene ID: Rep_2080_c_26_480
Type: STP
Location: 461890 - 462474 (+)
Gene ID: Rep_2080_c_26_481
Type: CAZyme
Location: 462471 - 463919 (+)
Gene ID: Rep_2080_c_26_482
Type: peptidase
Location: 463944 - 465467 (+)
Gene ID: Rep_2080_c_26_483
Type: CAZyme
Location: 465508 - 467334 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List