Cluster: Rep_2080_CGC34
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2080
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2080_c_24 | Rep_2080_c_24_609 | 569587 | 572178 | - | 3.A.9.1.2 |
| TC | Rep_2080_c_24 | Rep_2080_c_24_610 | 572371 | 572898 | - | 2.A.5.5.2 |
| TC | Rep_2080_c_24 | Rep_2080_c_24_611 | 572891 | 573148 | - | 2.A.5.5.2 |
| TC | Rep_2080_c_24 | Rep_2080_c_24_612 | 573201 | 573869 | - | 2.A.115.2.14 |
| TC | Rep_2080_c_24 | Rep_2080_c_24_613 | 573883 | 575250 | - | 2.A.66.1.32 |
| CAZyme | Rep_2080_c_24 | Rep_2080_c_24_614 | 575658 | 576668 | + | CE19 |
Gene ID: Rep_2080_c_24_609
Type: TC
Location: 569587 - 572178 (-)
Type: TC
Location: 569587 - 572178 (-)
Gene ID: Rep_2080_c_24_610
Type: TC
Location: 572371 - 572898 (-)
Type: TC
Location: 572371 - 572898 (-)
Gene ID: Rep_2080_c_24_611
Type: TC
Location: 572891 - 573148 (-)
Type: TC
Location: 572891 - 573148 (-)
Gene ID: Rep_2080_c_24_612
Type: TC
Location: 573201 - 573869 (-)
Type: TC
Location: 573201 - 573869 (-)
Gene ID: Rep_2080_c_24_613
Type: TC
Location: 573883 - 575250 (-)
Type: TC
Location: 573883 - 575250 (-)
Gene ID: Rep_2080_c_24_614
Type: CAZyme
Location: 575658 - 576668 (+)
Type: CAZyme
Location: 575658 - 576668 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp003478355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.