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Cluster: Rep_2080_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2080_c_24 Rep_2080_c_24_439 411073 412104 + GT2
pfam Rep_2080_c_24 Rep_2080_c_24_440 412135 413160 - MFS_1
NULL(UNKNOWN) Rep_2080_c_24 Rep_2080_c_24_441 413157 413381 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2080_c_24 Rep_2080_c_24_442 413431 414930 - GH51_1
NULL(UNKNOWN) Rep_2080_c_24 Rep_2080_c_24_443 415027 415167 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase Rep_2080_c_24 Rep_2080_c_24_444 415236 415970 - S33.UPW
TC Rep_2080_c_24 Rep_2080_c_24_445 415993 417297 - 2.A.11.1.2
peptidase Rep_2080_c_24 Rep_2080_c_24_446 417335 418177 - S33.UNW
TF Rep_2080_c_24 Rep_2080_c_24_447 418330 419253 + HTH_1
TC Rep_2080_c_24 Rep_2080_c_24_448 419324 420547 - 2.A.1.11.3
TC Rep_2080_c_24 Rep_2080_c_24_449 420648 422054 - 2.A.2.3.3
Gene ID: Rep_2080_c_24_439
Type: CAZyme
Location: 411073 - 412104 (+)
Gene ID: Rep_2080_c_24_440
Type: pfam
Location: 412135 - 413160 (-)
Gene ID: Rep_2080_c_24_441
Type:
Location: 413157 - 413381 (-)
Gene ID: Rep_2080_c_24_442
Type: CAZyme
Location: 413431 - 414930 (-)
Gene ID: Rep_2080_c_24_443
Type:
Location: 415027 - 415167 (-)
Gene ID: Rep_2080_c_24_444
Type: peptidase
Location: 415236 - 415970 (-)
Gene ID: Rep_2080_c_24_445
Type: TC
Location: 415993 - 417297 (-)
Gene ID: Rep_2080_c_24_446
Type: peptidase
Location: 417335 - 418177 (-)
Gene ID: Rep_2080_c_24_447
Type: TF
Location: 418330 - 419253 (+)
Gene ID: Rep_2080_c_24_448
Type: TC
Location: 419324 - 420547 (-)
Gene ID: Rep_2080_c_24_449
Type: TC
Location: 420648 - 422054 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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