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Cluster: Rep_2080_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2080_c_24 Rep_2080_c_24_237 225321 226070 - 2.A.102.3.2
CAZyme Rep_2080_c_24 Rep_2080_c_24_238 226540 228234 - GH13_31
TC Rep_2080_c_24 Rep_2080_c_24_239 228289 230043 - 3.A.1.120.4
pfam Rep_2080_c_24 Rep_2080_c_24_240 230167 230955 - NAD_binding_2 | F420_oxidored | P5CR_dimer
sulfatase Rep_2080_c_24 Rep_2080_c_24_241 231167 232321 - S1_7
TC Rep_2080_c_24 Rep_2080_c_24_242 232415 232843 - 1.A.33.1.4
TC Rep_2080_c_24 Rep_2080_c_24_243 233067 234281 - 1.A.33.1.4
Gene ID: Rep_2080_c_24_237
Type: TC
Location: 225321 - 226070 (-)
Gene ID: Rep_2080_c_24_238
Type: CAZyme
Location: 226540 - 228234 (-)
Gene ID: Rep_2080_c_24_239
Type: TC
Location: 228289 - 230043 (-)
Gene ID: Rep_2080_c_24_240
Type: pfam
Location: 230167 - 230955 (-)
Gene ID: Rep_2080_c_24_241
Type: sulfatase
Location: 231167 - 232321 (-)
Gene ID: Rep_2080_c_24_242
Type: TC
Location: 232415 - 232843 (-)
Gene ID: Rep_2080_c_24_243
Type: TC
Location: 233067 - 234281 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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