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Cluster: Rep_2080_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2080_c_3 Rep_2080_c_3_332 299117 300571 + 3.B.1.1.5
pfam Rep_2080_c_3 Rep_2080_c_3_333 300589 301368 + OAD_gamma
TC Rep_2080_c_3 Rep_2080_c_3_334 301402 301776 + 3.B.1.1.2
TC Rep_2080_c_3 Rep_2080_c_3_335 301826 302977 + 3.B.1.1.3
TC Rep_2080_c_3 Rep_2080_c_3_336 303019 304428 + 3.B.1.1.6
CAZyme Rep_2080_c_3 Rep_2080_c_3_337 304804 307152 + GH73
Gene ID: Rep_2080_c_3_332
Type: TC
Location: 299117 - 300571 (+)
Gene ID: Rep_2080_c_3_333
Type: pfam
Location: 300589 - 301368 (+)
Gene ID: Rep_2080_c_3_334
Type: TC
Location: 301402 - 301776 (+)
Gene ID: Rep_2080_c_3_335
Type: TC
Location: 301826 - 302977 (+)
Gene ID: Rep_2080_c_3_336
Type: TC
Location: 303019 - 304428 (+)
Gene ID: Rep_2080_c_3_337
Type: CAZyme
Location: 304804 - 307152 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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