Cluster: Rep_2080_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2080
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2080_c_3 | Rep_2080_c_3_179 | 166986 | 168344 | + | 3.A.1.1.40 |
| TC | Rep_2080_c_3 | Rep_2080_c_3_180 | 168393 | 169325 | + | 3.A.1.1.25 |
| TC | Rep_2080_c_3 | Rep_2080_c_3_181 | 169393 | 170181 | + | 3.A.1.1.25 |
| pfam | Rep_2080_c_3 | Rep_2080_c_3_182 | 170200 | 171057 | + | F_bP_aldolase |
| STP | Rep_2080_c_3 | Rep_2080_c_3_183 | 171073 | 172122 | + | SIS | SIS |
| CAZyme | Rep_2080_c_3 | Rep_2080_c_3_184 | 172192 | 173340 | + | CE9 |
Gene ID: Rep_2080_c_3_179
Type: TC
Location: 166986 - 168344 (+)
Type: TC
Location: 166986 - 168344 (+)
Gene ID: Rep_2080_c_3_180
Type: TC
Location: 168393 - 169325 (+)
Type: TC
Location: 168393 - 169325 (+)
Gene ID: Rep_2080_c_3_181
Type: TC
Location: 169393 - 170181 (+)
Type: TC
Location: 169393 - 170181 (+)
Gene ID: Rep_2080_c_3_182
Type: pfam
Location: 170200 - 171057 (+)
Type: pfam
Location: 170200 - 171057 (+)
Gene ID: Rep_2080_c_3_183
Type: STP
Location: 171073 - 172122 (+)
Type: STP
Location: 171073 - 172122 (+)
Gene ID: Rep_2080_c_3_184
Type: CAZyme
Location: 172192 - 173340 (+)
Type: CAZyme
Location: 172192 - 173340 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp003478355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.