Cluster: Rep_2080_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2080
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2080_c_3 | Rep_2080_c_3_147 | 125691 | 126638 | + | 3.A.1.1.10 |
| TC | Rep_2080_c_3 | Rep_2080_c_3_148 | 126649 | 127545 | + | 3.A.1.1.10 |
| TC | Rep_2080_c_3 | Rep_2080_c_3_149 | 127566 | 129209 | + | 3.A.1.1.10 |
| sulfatase | Rep_2080_c_3 | Rep_2080_c_3_150 | 129497 | 130894 | + | S1_27 |
| pfam | Rep_2080_c_3 | Rep_2080_c_3_151 | 131331 | 134156 | + | AAA_21 | UvrA_DNA-bind | UvrA_inter |
| CAZyme | Rep_2080_c_3 | Rep_2080_c_3_152 | 134153 | 136285 | - | GH42 |
Gene ID: Rep_2080_c_3_147
Type: TC
Location: 125691 - 126638 (+)
Type: TC
Location: 125691 - 126638 (+)
Gene ID: Rep_2080_c_3_148
Type: TC
Location: 126649 - 127545 (+)
Type: TC
Location: 126649 - 127545 (+)
Gene ID: Rep_2080_c_3_149
Type: TC
Location: 127566 - 129209 (+)
Type: TC
Location: 127566 - 129209 (+)
Gene ID: Rep_2080_c_3_150
Type: sulfatase
Location: 129497 - 130894 (+)
Type: sulfatase
Location: 129497 - 130894 (+)
Gene ID: Rep_2080_c_3_151
Type: pfam
Location: 131331 - 134156 (+)
Type: pfam
Location: 131331 - 134156 (+)
Gene ID: Rep_2080_c_3_152
Type: CAZyme
Location: 134153 - 136285 (-)
Type: CAZyme
Location: 134153 - 136285 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp003478355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.