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Cluster: Rep_207_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_207_c_0 Rep_207_c_0_1057 1296682 1298562 + 3.A.3.6.5
pfam Rep_207_c_0 Rep_207_c_0_1058 1298578 1299615 - AsnA
TC Rep_207_c_0 Rep_207_c_0_1059 1300005 1302356 + 1.B.14.14.1
TC Rep_207_c_0 Rep_207_c_0_1060 1302364 1302963 + 4.B.1.1.4
pfam Rep_207_c_0 Rep_207_c_0_1061 1303516 1304013 + DEDD_Tnp_IS110
pfam Rep_207_c_0 Rep_207_c_0_1062 1304058 1304525 + Transposase_20
CAZyme Rep_207_c_0 Rep_207_c_0_1063 1304699 1305838 - GT19
Gene ID: Rep_207_c_0_1057
Type: TC
Location: 1296682 - 1298562 (+)
Gene ID: Rep_207_c_0_1058
Type: pfam
Location: 1298578 - 1299615 (-)
Gene ID: Rep_207_c_0_1059
Type: TC
Location: 1300005 - 1302356 (+)
Gene ID: Rep_207_c_0_1060
Type: TC
Location: 1302364 - 1302963 (+)
Gene ID: Rep_207_c_0_1061
Type: pfam
Location: 1303516 - 1304013 (+)
Gene ID: Rep_207_c_0_1062
Type: pfam
Location: 1304058 - 1304525 (+)
Gene ID: Rep_207_c_0_1063
Type: CAZyme
Location: 1304699 - 1305838 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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