Cluster: Rep_206_CGC42
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_206
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_206_c_3 | Rep_206_c_3_817 | 932989 | 934533 | - | GH32 |
| pfam | Rep_206_c_3 | Rep_206_c_3_818 | 934538 | 936043 | - | DUF4960 |
| pfam | Rep_206_c_3 | Rep_206_c_3_819 | 936160 | 937905 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_206_c_3 | Rep_206_c_3_820 | 937972 | 941058 | - | 1.B.14.6.1 |
| CAZyme | Rep_206_c_3 | Rep_206_c_3_821 | 941649 | 943373 | + | GH32 |
| TC | Rep_206_c_3 | Rep_206_c_3_822 | 943415 | 944626 | + | 2.A.1.7.17 |
Gene ID: Rep_206_c_3_817
Type: CAZyme
Location: 932989 - 934533 (-)
Type: CAZyme
Location: 932989 - 934533 (-)
Gene ID: Rep_206_c_3_818
Type: pfam
Location: 934538 - 936043 (-)
Type: pfam
Location: 934538 - 936043 (-)
Gene ID: Rep_206_c_3_819
Type: pfam
Location: 936160 - 937905 (-)
Type: pfam
Location: 936160 - 937905 (-)
Gene ID: Rep_206_c_3_820
Type: TC
Location: 937972 - 941058 (-)
Type: TC
Location: 937972 - 941058 (-)
Gene ID: Rep_206_c_3_821
Type: CAZyme
Location: 941649 - 943373 (+)
Type: CAZyme
Location: 941649 - 943373 (+)
Gene ID: Rep_206_c_3_822
Type: TC
Location: 943415 - 944626 (+)
Type: TC
Location: 943415 - 944626 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.