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Cluster: Rep_206_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_206_c_3 Rep_206_c_3_746 835849 838422 + 9.B.144.1.4
CAZyme Rep_206_c_3 Rep_206_c_3_747 838626 840926 - GH92
NULL(UNKNOWN) Rep_206_c_3 Rep_206_c_3_748 840923 841021 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_206_c_3 Rep_206_c_3_749 841474 843525 - GH146
sulfatase Rep_206_c_3 Rep_206_c_3_750 844053 846572 - S1_4
CAZyme Rep_206_c_3 Rep_206_c_3_751 847055 848086 + GH43_26
pfam Rep_206_c_3 Rep_206_c_3_752 848429 849475 - DUF4831
pfam Rep_206_c_3 Rep_206_c_3_753 849583 851166 - Carb_kinase | YjeF_N
TC Rep_206_c_3 Rep_206_c_3_754 851432 852181 - 1.B.44.1.2
Gene ID: Rep_206_c_3_746
Type: TC
Location: 835849 - 838422 (+)
Gene ID: Rep_206_c_3_747
Type: CAZyme
Location: 838626 - 840926 (-)
Gene ID: Rep_206_c_3_748
Type:
Location: 840923 - 841021 (-)
Gene ID: Rep_206_c_3_749
Type: CAZyme
Location: 841474 - 843525 (-)
Gene ID: Rep_206_c_3_750
Type: sulfatase
Location: 844053 - 846572 (-)
Gene ID: Rep_206_c_3_751
Type: CAZyme
Location: 847055 - 848086 (+)
Gene ID: Rep_206_c_3_752
Type: pfam
Location: 848429 - 849475 (-)
Gene ID: Rep_206_c_3_753
Type: pfam
Location: 849583 - 851166 (-)
Gene ID: Rep_206_c_3_754
Type: TC
Location: 851432 - 852181 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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