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Cluster: Rep_206_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_206_c_3 Rep_206_c_3_626 678469 681531 + GH95
NULL(UNKNOWN) Rep_206_c_3 Rep_206_c_3_627 681412 681657 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_206_c_3 Rep_206_c_3_628 681693 682742 + 3.B.1.1.6
pfam Rep_206_c_3 Rep_206_c_3_629 682806 683468 + PYC_OADA | Biotin_lipoyl_2
STP Rep_206_c_3 Rep_206_c_3_630 683614 684150 + HD
TC Rep_206_c_3 Rep_206_c_3_631 684171 687023 + 1.B.42.1.8
TC Rep_206_c_3 Rep_206_c_3_632 687289 689370 + 3.A.7.7.1
TC Rep_206_c_3 Rep_206_c_3_633 689423 691573 + 1.B.6.1.1
Gene ID: Rep_206_c_3_626
Type: CAZyme
Location: 678469 - 681531 (+)
Gene ID: Rep_206_c_3_627
Type:
Location: 681412 - 681657 (-)
Gene ID: Rep_206_c_3_628
Type: TC
Location: 681693 - 682742 (+)
Gene ID: Rep_206_c_3_629
Type: pfam
Location: 682806 - 683468 (+)
Gene ID: Rep_206_c_3_630
Type: STP
Location: 683614 - 684150 (+)
Gene ID: Rep_206_c_3_631
Type: TC
Location: 684171 - 687023 (+)
Gene ID: Rep_206_c_3_632
Type: TC
Location: 687289 - 689370 (+)
Gene ID: Rep_206_c_3_633
Type: TC
Location: 689423 - 691573 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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