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Cluster: Rep_206_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_206_c_3 Rep_206_c_3_411 436003 436623 + 2.A.1.35.1
TC Rep_206_c_3 Rep_206_c_3_412 436593 437237 + 2.A.1.35.2
pfam Rep_206_c_3 Rep_206_c_3_413 437593 438477 + CN_hydrolase
CAZyme Rep_206_c_3 Rep_206_c_3_414 438556 441267 + GH20
NULL(UNKNOWN) Rep_206_c_3 Rep_206_c_3_415 441507 442814 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_206_c_3 Rep_206_c_3_416 442915 444189 - BT1 | MFS_1
CAZyme Rep_206_c_3 Rep_206_c_3_417 444307 448104 - GT2
CAZyme Rep_206_c_3 Rep_206_c_3_418 448432 450420 + GH51_2
CAZyme Rep_206_c_3 Rep_206_c_3_419 450644 452695 + GH51_2
Gene ID: Rep_206_c_3_411
Type: TC
Location: 436003 - 436623 (+)
Gene ID: Rep_206_c_3_412
Type: TC
Location: 436593 - 437237 (+)
Gene ID: Rep_206_c_3_413
Type: pfam
Location: 437593 - 438477 (+)
Gene ID: Rep_206_c_3_414
Type: CAZyme
Location: 438556 - 441267 (+)
Gene ID: Rep_206_c_3_415
Type:
Location: 441507 - 442814 (-)
Gene ID: Rep_206_c_3_416
Type: pfam
Location: 442915 - 444189 (-)
Gene ID: Rep_206_c_3_417
Type: CAZyme
Location: 444307 - 448104 (-)
Gene ID: Rep_206_c_3_418
Type: CAZyme
Location: 448432 - 450420 (+)
Gene ID: Rep_206_c_3_419
Type: CAZyme
Location: 450644 - 452695 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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