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Cluster: Rep_206_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_206_c_3 Rep_206_c_3_307 312866 314497 + GH20
NULL(UNKNOWN) Rep_206_c_3 Rep_206_c_3_308 314688 315860 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_206_c_3 Rep_206_c_3_309 315885 316766 + PNP_UDP_1
TC Rep_206_c_3 Rep_206_c_3_310 317244 318518 - 3.D.5.1.1
TC Rep_206_c_3 Rep_206_c_3_311 318538 319164 - 3.D.5.1.1
TC Rep_206_c_3 Rep_206_c_3_312 319167 319793 - 3.D.5.1.1
TC Rep_206_c_3 Rep_206_c_3_313 319805 320407 - 3.D.5.1.1
TC Rep_206_c_3 Rep_206_c_3_314 320423 321586 - 3.D.5.1.1
Gene ID: Rep_206_c_3_307
Type: CAZyme
Location: 312866 - 314497 (+)
Gene ID: Rep_206_c_3_308
Type:
Location: 314688 - 315860 (+)
Gene ID: Rep_206_c_3_309
Type: pfam
Location: 315885 - 316766 (+)
Gene ID: Rep_206_c_3_310
Type: TC
Location: 317244 - 318518 (-)
Gene ID: Rep_206_c_3_311
Type: TC
Location: 318538 - 319164 (-)
Gene ID: Rep_206_c_3_312
Type: TC
Location: 319167 - 319793 (-)
Gene ID: Rep_206_c_3_313
Type: TC
Location: 319805 - 320407 (-)
Gene ID: Rep_206_c_3_314
Type: TC
Location: 320423 - 321586 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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