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Cluster: Rep_206_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_206_c_2 Rep_206_c_2_920 1172292 1173494 + 2.A.1.2.18
TC Rep_206_c_2 Rep_206_c_2_921 1173610 1175199 + 3.D.10.1.4
pfam Rep_206_c_2 Rep_206_c_2_922 1175393 1175806 + bPH_4
peptidase Rep_206_c_2 Rep_206_c_2_923 1175806 1177059 + S13.UPW
TC Rep_206_c_2 Rep_206_c_2_924 1177072 1178589 + 3.A.7.16.1
pfam Rep_206_c_2 Rep_206_c_2_925 1178624 1179175 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8
pfam Rep_206_c_2 Rep_206_c_2_926 1179200 1179856 + SprT-like
CAZyme Rep_206_c_2 Rep_206_c_2_927 1180117 1181262 - GT19
Gene ID: Rep_206_c_2_920
Type: TC
Location: 1172292 - 1173494 (+)
Gene ID: Rep_206_c_2_921
Type: TC
Location: 1173610 - 1175199 (+)
Gene ID: Rep_206_c_2_922
Type: pfam
Location: 1175393 - 1175806 (+)
Gene ID: Rep_206_c_2_923
Type: peptidase
Location: 1175806 - 1177059 (+)
Gene ID: Rep_206_c_2_924
Type: TC
Location: 1177072 - 1178589 (+)
Gene ID: Rep_206_c_2_925
Type: pfam
Location: 1178624 - 1179175 (+)
Gene ID: Rep_206_c_2_926
Type: pfam
Location: 1179200 - 1179856 (+)
Gene ID: Rep_206_c_2_927
Type: CAZyme
Location: 1180117 - 1181262 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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