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Cluster: Rep_206_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_206_c_2 Rep_206_c_2_847 1056960 1061108 - GH2
NULL(UNKNOWN) Rep_206_c_2 Rep_206_c_2_848 1061121 1062269 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_206_c_2 Rep_206_c_2_849 1062295 1062450 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_206_c_2 Rep_206_c_2_850 1062793 1064817 - GH13_7
pfam Rep_206_c_2 Rep_206_c_2_851 1065199 1066062 - SusF_N
pfam Rep_206_c_2 Rep_206_c_2_852 1066117 1067001 - SusE
TC Rep_206_c_2 Rep_206_c_2_853 1067035 1068648 - 8.A.46.1.1
TC Rep_206_c_2 Rep_206_c_2_854 1068692 1071781 - 1.B.14.6.1
TF Rep_206_c_2 Rep_206_c_2_855 1072012 1073043 + LacI
TC Rep_206_c_2 Rep_206_c_2_856 1073100 1074410 + 2.A.2.6.2
CAZyme Rep_206_c_2 Rep_206_c_2_857 1074461 1077133 + GH77
CAZyme Rep_206_c_2 Rep_206_c_2_858 1077186 1079321 + GH97
CAZyme Rep_206_c_2 Rep_206_c_2_859 1079390 1081327 + GH13_14
CAZyme Rep_206_c_2 Rep_206_c_2_860 1081382 1083274 + GH13_46
pfam Rep_206_c_2 Rep_206_c_2_861 1083489 1084733 - N-glycanase_N | N-glycanase_C
CAZyme Rep_206_c_2 Rep_206_c_2_862 1084765 1086114 - GH29
pfam Rep_206_c_2 Rep_206_c_2_863 1086308 1088326 - SusD-like | SusD-like | SusD-like_2 | SusD-like_2
TC Rep_206_c_2 Rep_206_c_2_864 1088368 1091499 - 1.B.14.6.2
NULL(UNKNOWN) Rep_206_c_2 Rep_206_c_2_865 1091745 1091993 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_206_c_2 Rep_206_c_2_866 1092408 1094306 + Transket_pyr | Transketolase_C | DXP_synthase_N
TC Rep_206_c_2 Rep_206_c_2_867 1094312 1095655 + 2.A.38.1.1
TC Rep_206_c_2 Rep_206_c_2_868 1095652 1097103 + 2.A.38.1.3
Gene ID: Rep_206_c_2_847
Type: CAZyme
Location: 1056960 - 1061108 (-)
Gene ID: Rep_206_c_2_848
Type:
Location: 1061121 - 1062269 (-)
Gene ID: Rep_206_c_2_849
Type:
Location: 1062295 - 1062450 (-)
Gene ID: Rep_206_c_2_850
Type: CAZyme
Location: 1062793 - 1064817 (-)
Gene ID: Rep_206_c_2_851
Type: pfam
Location: 1065199 - 1066062 (-)
Gene ID: Rep_206_c_2_852
Type: pfam
Location: 1066117 - 1067001 (-)
Gene ID: Rep_206_c_2_853
Type: TC
Location: 1067035 - 1068648 (-)
Gene ID: Rep_206_c_2_854
Type: TC
Location: 1068692 - 1071781 (-)
Gene ID: Rep_206_c_2_855
Type: TF
Location: 1072012 - 1073043 (+)
Gene ID: Rep_206_c_2_856
Type: TC
Location: 1073100 - 1074410 (+)
Gene ID: Rep_206_c_2_857
Type: CAZyme
Location: 1074461 - 1077133 (+)
Gene ID: Rep_206_c_2_858
Type: CAZyme
Location: 1077186 - 1079321 (+)
Gene ID: Rep_206_c_2_859
Type: CAZyme
Location: 1079390 - 1081327 (+)
Gene ID: Rep_206_c_2_860
Type: CAZyme
Location: 1081382 - 1083274 (+)
Gene ID: Rep_206_c_2_861
Type: pfam
Location: 1083489 - 1084733 (-)
Gene ID: Rep_206_c_2_862
Type: CAZyme
Location: 1084765 - 1086114 (-)
Gene ID: Rep_206_c_2_863
Type: pfam
Location: 1086308 - 1088326 (-)
Gene ID: Rep_206_c_2_864
Type: TC
Location: 1088368 - 1091499 (-)
Gene ID: Rep_206_c_2_865
Type:
Location: 1091745 - 1091993 (-)
Gene ID: Rep_206_c_2_866
Type: pfam
Location: 1092408 - 1094306 (+)
Gene ID: Rep_206_c_2_867
Type: TC
Location: 1094312 - 1095655 (+)
Gene ID: Rep_206_c_2_868
Type: TC
Location: 1095652 - 1097103 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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