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Cluster: Rep_206_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_206_c_2 Rep_206_c_2_741 921888 923291 + GH144
CAZyme Rep_206_c_2 Rep_206_c_2_742 923809 925623 + GH3
pfam Rep_206_c_2 Rep_206_c_2_743 925727 926563 + DUF4886
pfam Rep_206_c_2 Rep_206_c_2_744 927030 928079 + OprB
TC Rep_206_c_2 Rep_206_c_2_745 928430 928654 + 1.A.33.1.4
TC Rep_206_c_2 Rep_206_c_2_746 928647 928913 + 1.A.33.1.2
TC Rep_206_c_2 Rep_206_c_2_747 928900 929196 + 1.A.33.1.4
TC Rep_206_c_2 Rep_206_c_2_748 929184 930350 + 1.A.33.1.2
Gene ID: Rep_206_c_2_741
Type: CAZyme
Location: 921888 - 923291 (+)
Gene ID: Rep_206_c_2_742
Type: CAZyme
Location: 923809 - 925623 (+)
Gene ID: Rep_206_c_2_743
Type: pfam
Location: 925727 - 926563 (+)
Gene ID: Rep_206_c_2_744
Type: pfam
Location: 927030 - 928079 (+)
Gene ID: Rep_206_c_2_745
Type: TC
Location: 928430 - 928654 (+)
Gene ID: Rep_206_c_2_746
Type: TC
Location: 928647 - 928913 (+)
Gene ID: Rep_206_c_2_747
Type: TC
Location: 928900 - 929196 (+)
Gene ID: Rep_206_c_2_748
Type: TC
Location: 929184 - 930350 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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