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Cluster: Rep_206_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_206_c_0 Rep_206_c_0_110 133515 134984 + 2.A.47.1.12
CAZyme Rep_206_c_0 Rep_206_c_0_111 135215 135922 + GH25
pfam Rep_206_c_0 Rep_206_c_0_112 135957 137057 + TPR_21 | DZR | Zn_Ribbon_1 | Zn_ribbon_3
CAZyme Rep_206_c_0 Rep_206_c_0_113 137118 138008 + GH73
TC Rep_206_c_0 Rep_206_c_0_114 138002 138955 - 2.A.4.7.9
TC Rep_206_c_0 Rep_206_c_0_115 139077 140042 - 3.A.2.1.1
TC Rep_206_c_0 Rep_206_c_0_116 140049 141635 - 3.A.2.1.3
pfam Rep_206_c_0 Rep_206_c_0_117 141653 142186 - OSCP
pfam Rep_206_c_0 Rep_206_c_0_118 142189 142716 - ATP-synt_B | YMF19
TC Rep_206_c_0 Rep_206_c_0_119 142743 142985 - 3.A.2.1.6
TC Rep_206_c_0 Rep_206_c_0_120 143089 144141 - 3.A.2.1.6
NULL(UNKNOWN) Rep_206_c_0 Rep_206_c_0_121 144169 144579 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_206_c_0 Rep_206_c_0_122 144594 144836 - ATP-synt_DE_N
TC Rep_206_c_0 Rep_206_c_0_123 144856 146382 - 3.A.2.1.2
pfam Rep_206_c_0 Rep_206_c_0_124 146594 147571 - PFK
TC Rep_206_c_0 Rep_206_c_0_125 147633 149024 - 2.A.62.1.3
Gene ID: Rep_206_c_0_110
Type: TC
Location: 133515 - 134984 (+)
Gene ID: Rep_206_c_0_111
Type: CAZyme
Location: 135215 - 135922 (+)
Gene ID: Rep_206_c_0_112
Type: pfam
Location: 135957 - 137057 (+)
Gene ID: Rep_206_c_0_113
Type: CAZyme
Location: 137118 - 138008 (+)
Gene ID: Rep_206_c_0_114
Type: TC
Location: 138002 - 138955 (-)
Gene ID: Rep_206_c_0_115
Type: TC
Location: 139077 - 140042 (-)
Gene ID: Rep_206_c_0_116
Type: TC
Location: 140049 - 141635 (-)
Gene ID: Rep_206_c_0_117
Type: pfam
Location: 141653 - 142186 (-)
Gene ID: Rep_206_c_0_118
Type: pfam
Location: 142189 - 142716 (-)
Gene ID: Rep_206_c_0_119
Type: TC
Location: 142743 - 142985 (-)
Gene ID: Rep_206_c_0_120
Type: TC
Location: 143089 - 144141 (-)
Gene ID: Rep_206_c_0_121
Type:
Location: 144169 - 144579 (-)
Gene ID: Rep_206_c_0_122
Type: pfam
Location: 144594 - 144836 (-)
Gene ID: Rep_206_c_0_123
Type: TC
Location: 144856 - 146382 (-)
Gene ID: Rep_206_c_0_124
Type: pfam
Location: 146594 - 147571 (-)
Gene ID: Rep_206_c_0_125
Type: TC
Location: 147633 - 149024 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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