Cluster: Rep_2060_CGC91
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2060_c_62 | Rep_2060_c_62_3 | 1969 | 2922 | + | 3.A.1.1.10 |
| STP | Rep_2060_c_62 | Rep_2060_c_62_4 | 3083 | 4834 | + | SBP_bac_1 |
| TC | Rep_2060_c_62 | Rep_2060_c_62_5 | 4902 | 5831 | + | 3.A.1.1.29 |
| peptidase | Rep_2060_c_62 | Rep_2060_c_62_6 | 5913 | 7352 | + | M17.UPW |
| NULL(UNKNOWN) | Rep_2060_c_62 | Rep_2060_c_62_7 | 7333 | 8925 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2060_c_62 | Rep_2060_c_62_8 | 8938 | 10602 | + | GH123 |
| TC | Rep_2060_c_62 | Rep_2060_c_62_9 | 10639 | 12420 | + | 8.A.59.2.1 |
Gene ID: Rep_2060_c_62_3
Type: TC
Location: 1969 - 2922 (+)
Type: TC
Location: 1969 - 2922 (+)
Gene ID: Rep_2060_c_62_4
Type: STP
Location: 3083 - 4834 (+)
Type: STP
Location: 3083 - 4834 (+)
Gene ID: Rep_2060_c_62_5
Type: TC
Location: 4902 - 5831 (+)
Type: TC
Location: 4902 - 5831 (+)
Gene ID: Rep_2060_c_62_6
Type: peptidase
Location: 5913 - 7352 (+)
Type: peptidase
Location: 5913 - 7352 (+)
Gene ID: Rep_2060_c_62_7
Type:
Location: 7333 - 8925 (+)
Type:
Location: 7333 - 8925 (+)
Gene ID: Rep_2060_c_62_8
Type: CAZyme
Location: 8938 - 10602 (+)
Type: CAZyme
Location: 8938 - 10602 (+)
Gene ID: Rep_2060_c_62_9
Type: TC
Location: 10639 - 12420 (+)
Type: TC
Location: 10639 - 12420 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.