PROTEIN: Rep_2060_c_62_7
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Protein File & Metadata
Source:
Rep_2060_c_62_7.pdb
Genome ID:
Protein ID:
Rep_2060_c_62_7
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Detailed structural information will appear here after analysis...
Protein Sequence
MTDYYFDTYI KKEVLENYLS RAVTAAGLLD SSTLDDDLRA IRDLGVKFLG RASGVWYMSM 60 DEEEHFEKSR ELAKKVHEID EDIILQSCIF EIIVEKINEI PIPAYVFEAF GEKPEVRNFC 120 LEKALFPQKP PGFIHTSHEK EKNGGIPDLN RLEARMWFYY RATRYIDCGY EALHMGQVHL 180 YTANDRGFGK TEELFTLIRE YGKKHARRRK VLLDAHTHGI NIRGRLLFDY HAMPFTGVPL 240 IEHVGHKQVL VREGFSEGGS NPNGWSAQAM PYLMEYDNWG GKVVERFDAY TREELAKKDW 300 WGYDQIGWFA NQDEEARNHF LEYTYYWTET QNPNAYFEVP FRRMLSDAAI LKEREDGTKG 360 IQEFYQINDK SKGCPMGFSQ EGTLRRLWSM NHILREKAAN PENLTDYGAR DIYDEETGVK 420 LPEKVVVYGS FQPLVGAVKN DSNSEVTRMY YLGGGTYGLT AVIPYAGTYD YAVSTYGTLS 480 ATYCYDCFPR SGSSNKAILV TDRDNTVVRF TYRFSDHKVC AETIETSYIP 530
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K7KM60-F1-model_v4 | 1 | 530 | 18 | 418 | 0.4459 |
0.653 |
| AF-K7KUJ3-F1-model_v4 | 1 | 530 | 20 | 419 | 0.4424 |
0.65 |
| AF-I1KNX2-F1-model_v4 | 3 | 530 | 20 | 419 | 0.4417 |
0.6499 |
| AF-A0A1D6FPT2-F1-model_v4 | 1 | 530 | 23 | 735 | 0.4242 |
0.5211 |
| AF-A0A0R0HAY2-F1-model_v4 | 1 | 530 | 34 | 741 | 0.4184 |
0.5191 |
| AF-Q9SCV3-F1-model_v4 | 1 | 530 | 31 | 777 | 0.4034 |
0.5089 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A097IEW0-F1-model_v4 | GH13 | 14 | 529 | 1 | 383 | 0.5793 |
0.685 |
| AF-A0A7Z2VP05-F1-model_v4 | CBM23 | 1 | 529 | 30 | 712 | 0.5769 |
0.7256 |
| AF-A0A0G3H8Y2-F1-model_v4 | GH13 | 11 | 529 | 1 | 396 | 0.5754 |
0.6745 |
| AF-M1MWA6-F1-model_v4 | GH13 | 11 | 529 | 1 | 403 | 0.574 |
0.6684 |
| AF-A0A1H1U1S5-F1-model_v4 | GH13 | 14 | 529 | 1 | 387 | 0.5738 |
0.6789 |
| AF-A0A172QS68-F1-model_v4 | GH13 | 11 | 530 | 1 | 384 | 0.5735 |
0.6802 |
| AF-A0A344UVR1-F1-model_v4 | GH13 | 9 | 529 | 6 | 418 | 0.5699 |
0.6599 |
| AF-C8XHM0-F1-model_v4 | GH13 | 9 | 530 | 3 | 411 | 0.5684 |
0.6596 |
| AF-A0A2K9BEW5-F1-model_v4 | GH13 | 9 | 530 | 8 | 431 | 0.5634 |
0.646 |
| AF-A0A0K1F8G8-F1-model_v4 | GH13 | 11 | 530 | 1 | 423 | 0.562 |
0.6397 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7Z2VP05 | CBM23 | 1 | 529 | 30 | 712 | 0.5769 |
0.7256 |
| WIM68504.1 | GH13 | 6 | 530 | 1 | 403 | 0.5728 |
0.6743 |
| A0A3Q9G3Q8 | GH13 | 9 | 530 | 1 | 395 | 0.57 |
0.6708 |
| WDE98873.1 | GH168 | 1 | 527 | 24 | 398 | 0.5673 |
0.6961 |
| A0A8J2V362 | GH168 | 5 | 530 | 20 | 384 | 0.563 |
0.6957 |
| A0A3G6J505 | GH13 | 5 | 529 | 1 | 414 | 0.5625 |
0.6484 |
| A0A8B2SAU8 | GH13_16 | 10 | 527 | 1 | 533 | 0.5558 |
0.5947 |
| A0A060R749 | GH13 | 9 | 528 | 13 | 434 | 0.5544 |
0.6407 |
| S0DGB6 | GH13 | 11 | 527 | 39 | 457 | 0.5523 |
0.6568 |
| H1XTZ1 | GH13 | 8 | 528 | 38 | 463 | 0.5448 |
0.6412 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1wzl-assembly1.cif.gz_A | 10 | 527 | 123 | 583 | 0.4949 |
0.6016 |
| 3ogv-assembly1.cif.gz_A | 5 | 530 | 4 | 541 | 0.4122 |
0.5426 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.