Cluster: Rep_2060_CGC81
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_49 | Rep_2060_c_49_23 | 23306 | 24913 | - | CBM91 | GH43_11 |
| NULL(UNKNOWN) | Rep_2060_c_49 | Rep_2060_c_49_24 | 24910 | 27246 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2060_c_49 | Rep_2060_c_49_25 | 27250 | 28239 | - | 3.A.1.2.15 |
| TC | Rep_2060_c_49 | Rep_2060_c_49_26 | 28226 | 29743 | - | 3.A.1.2.20 |
| STP | Rep_2060_c_49 | Rep_2060_c_49_27 | 29769 | 30782 | - | Peripla_BP_1 |
| peptidase | Rep_2060_c_49 | Rep_2060_c_49_28 | 31242 | 31970 | - | M20.UNW |
| TC | Rep_2060_c_49 | Rep_2060_c_49_29 | 32005 | 33366 | - | 9.A.40.2.2 |
Gene ID: Rep_2060_c_49_23
Type: CAZyme
Location: 23306 - 24913 (-)
Type: CAZyme
Location: 23306 - 24913 (-)
Gene ID: Rep_2060_c_49_24
Type:
Location: 24910 - 27246 (-)
Type:
Location: 24910 - 27246 (-)
Gene ID: Rep_2060_c_49_25
Type: TC
Location: 27250 - 28239 (-)
Type: TC
Location: 27250 - 28239 (-)
Gene ID: Rep_2060_c_49_26
Type: TC
Location: 28226 - 29743 (-)
Type: TC
Location: 28226 - 29743 (-)
Gene ID: Rep_2060_c_49_27
Type: STP
Location: 29769 - 30782 (-)
Type: STP
Location: 29769 - 30782 (-)
Gene ID: Rep_2060_c_49_28
Type: peptidase
Location: 31242 - 31970 (-)
Type: peptidase
Location: 31242 - 31970 (-)
Gene ID: Rep_2060_c_49_29
Type: TC
Location: 32005 - 33366 (-)
Type: TC
Location: 32005 - 33366 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.