PROTEIN: Rep_2060_c_49_24
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Protein File & Metadata
Source:
Rep_2060_c_49_24.pdb
Genome ID:
Protein ID:
Rep_2060_c_49_24
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Detailed structural information will appear here after analysis...
Protein Sequence
MSRRIKFVGQ QEKYSVAIRD ERVKEGRNMD IFLDFPVVLQ NLEGAKRKLR YDSYNDSGNG 60 YNAVIQAEDL HGNRYEISDV WREEADFIRL DRNVSCIKCV KETGIRLTTE FRCRDDKADT 120 LDDYQFIIPG ALYNKNDTDD DGIDDYLGTF NQDYKDDRNP SLSVMAFCRN SKRFISLIRG 180 DLPQKDETIT RDQIRARHFI HDTDIGSLGL APSEYHAKEI ILRCDYPFYE RSSFCLNVDG 240 SEWSAYKKIT SGVKFGMTYL LKIDKAADLT EASWKTTQFQ MNRILNPSVE LPFTLEEARH 300 YRRQMIHNSF REFPDKKGSP AGYFVHFSPR QEYGAQNLLE YGFCGQQTLL SLDMLTAAKD 360 NQDITYREQA LKTIDYFIKN CIDDSGLPNG IYNVDKEEYV YWWTGILFPF QYSDDREELE 420 GYLGNQIVSS LMPVAEELRK VKGNYCRSMV DTMHYLMRCY LVEKEDGTDH PDWLAAVIKF 480 CDKLLEIQNE NGSWNRGYTM DGIPLTNPPQ WFGKTAAEQG SGAIFPAQIL IELYRFTGEE 540 KYLAAGVRAA EFVYEYYVKD VRYIGGLNDT THCKSVKIDA VGVMFAMRTM LLVYEQTGDI 600 KLLSGARDAA RILASWTYLW DIPFDRDTLL GQHGFKTTGW ACCDVIPGGS YVDCEFVEFI 660 PELLRIAEYC RDSELARLAG IVTRGMQHGL SMPQNMYGYA MPGIQCEGYM TSLWLADTEY 720 KGFSGAAAKN KGDDNDTCNG LVNAQALLNL DYLSKTYGTM DFEHIIGLIE KERHGYKL 778
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A4Y1VDV5-F1-model_v4 | GH182 | 21 | 757 | 7 | 661 | 0.8443 |
0.9308 |
| AF-Q8A3Q5-F1-model_v4 | GH182 | 1 | 757 | 15 | 673 | 0.8411 |
0.9298 |
| AF-A0A109W1T4-F1-model_v4 | GH182 | 23 | 757 | 8 | 653 | 0.841 |
0.933 |
| AF-C9KR64-F1-model_v4 | GH182 | 22 | 757 | 15 | 673 | 0.8404 |
0.9283 |
| AF-A0A6M4MIA1-F1-model_v4 | GH182 | 10 | 757 | 7 | 663 | 0.8399 |
0.9236 |
| AF-A0A6H0KIQ8-F1-model_v4 | GH182 | 23 | 757 | 16 | 673 | 0.8398 |
0.9289 |
| AF-A0A0P0GFT7-F1-model_v4 | GH182 | 20 | 757 | 16 | 669 | 0.8396 |
0.932 |
| AF-E6SMV6-F1-model_v4 | GH182 | 21 | 774 | 16 | 677 | 0.8386 |
0.9229 |
| AF-A0A1C7H3C6-F1-model_v4 | GH182 | 20 | 757 | 17 | 673 | 0.8385 |
0.9296 |
| AF-A0A0P0FJN3-F1-model_v4 | GH182 | 1 | 757 | 17 | 678 | 0.8385 |
0.9266 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9E8YN59 | GH182 | 9 | 757 | 11 | 661 | 0.838 |
0.9307 |
| A0A255SPN4 | GH182 | 23 | 757 | 12 | 661 | 0.8353 |
0.9279 |
| UJH67547.1 | GH182 | 6 | 757 | 20 | 666 | 0.8286 |
0.9295 |
| A0A268K8D9 | GH182 | 1 | 765 | 1 | 673 | 0.8237 |
0.8918 |
| A0A139L1L8 | GH182 | 22 | 757 | 42 | 699 | 0.8227 |
0.9284 |
| WHP16390.1 | GH182 | 7 | 764 | 1 | 673 | 0.8122 |
0.8798 |
| A0A6I6K1P7 | GH182 | 1 | 763 | 20 | 678 | 0.7978 |
0.8846 |
| A0A2S0VPZ6 | GH182 | 1 | 768 | 32 | 721 | 0.793 |
0.8676 |
| A0A1U9NH28 | GH182 | 1 | 762 | 25 | 681 | 0.791 |
0.8819 |
| A0A7Z2ZP54 | CBM13 , CBM66 | 1 | 775 | 385 | 1146 | 0.7059 |
0.8617 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 2 | 757 | 1 | 669 | 0.5788 |
0.6345 |
| 5nok-assembly1.cif.gz_A | 1 | 757 | 3 | 668 | 0.5754 |
0.6331 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.