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Cluster: Rep_2060_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2060_c_19 Rep_2060_c_19_22 26944 30147 - CBM32 | CBM32
CAZyme Rep_2060_c_19 Rep_2060_c_19_23 30212 34042 - GH136
NULL(UNKNOWN) Rep_2060_c_19 Rep_2060_c_19_24 34058 34930 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2060_c_19 Rep_2060_c_19_25 34917 37262 - GH65
TC Rep_2060_c_19 Rep_2060_c_19_26 37270 38112 - 3.A.1.1.47
TC Rep_2060_c_19 Rep_2060_c_19_27 38113 39000 - 3.A.1.1.47
TC Rep_2060_c_19 Rep_2060_c_19_28 39279 40709 - 3.A.1.1.47
TC Rep_2060_c_19 Rep_2060_c_19_29 40979 42745 + 8.A.59.2.1
Gene ID: Rep_2060_c_19_22
Type: CAZyme
Location: 26944 - 30147 (-)
Gene ID: Rep_2060_c_19_23
Type: CAZyme
Location: 30212 - 34042 (-)
Gene ID: Rep_2060_c_19_24
Type:
Location: 34058 - 34930 (-)
Gene ID: Rep_2060_c_19_25
Type: CAZyme
Location: 34917 - 37262 (-)
Gene ID: Rep_2060_c_19_26
Type: TC
Location: 37270 - 38112 (-)
Gene ID: Rep_2060_c_19_27
Type: TC
Location: 38113 - 39000 (-)
Gene ID: Rep_2060_c_19_28
Type: TC
Location: 39279 - 40709 (-)
Gene ID: Rep_2060_c_19_29
Type: TC
Location: 40979 - 42745 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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