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PROTEIN: Rep_2060_c_19_24

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Protein File & Metadata
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Source:
Rep_2060_c_19_24.pdb
Genome ID:
Rep_2060
Protein ID:
Rep_2060_c_19_24

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Protein Sequence 
MKKYKAIFFD   WDGTAVLSRR   APVDEVVAPM   KKLLAQGVKL   AVISGTTLEN   IAEGKLHEYF 60
TVEERKSLFL   GLGRGAYNYA   FDDNGSPYLL   SHRIPAKSGL   IRIHDICYDI   HRCLQEDYEI 120
PTDIVFSRPN   YCKIDLMVEN   SRGESLFLQE   GEKEQLIANL   NSHGFTGGIR   GLIDLAEDMG 180
RKHGISVCAT   TDAKYLEVGI   SSKSDNVNDF   MDYFGNQYQI   REEECSFWGD   EYIGFDECLF 240
GSDSYMITDQ   TRHGEFFDVS   DTEGLRPNEV   KQVGGGVGSF   IRFLTEQNNS 290
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q4E4A3-F1-model_v4 3 290 2 244 0.7087 0.7991
AF-A4IDG8-F1-model_v4 2 290 2 245 0.7082 0.7983
AF-Q38AW2-F1-model_v4 3 290 2 244 0.7035 0.7941
AF-Q8ZKU5-F1-model_v4 2 290 1 242 0.7007 0.7878
AF-B5DF46-F1-model_v4 4 290 2 242 0.7004 0.7919
AF-A0A175VZ70-F1-model_v4 26 290 1 226 0.6997 0.8123
AF-Q54X03-F1-model_v4 3 290 4 248 0.6955 0.785
AF-Q86B09-F1-model_v4 3 290 4 248 0.6945 0.7845
AF-Q32A04-F1-model_v4 3 290 1 266 0.6933 0.7423
AF-P27848-F1-model_v4 3 290 1 266 0.6932 0.7422
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0G9F9S7 GH73 3 290 2 256 0.5972 0.6633
APR83787.1 GH65 1 290 24 314 0.5914 0.94
AF-B4FE96-F1-model_v4 GT4 4 290 100 386 0.5739 0.6793
AF-C4IZ57-F1-model_v4 GT4 4 290 167 455 0.5408 0.6789
AF-A0A0P0Y112-F1-model_v4 GT4 4 290 232 508 0.4961 0.6679
A0A8K1Y6G1 CBM48 2 290 376 653 0.4954 0.719
AF-A0A0P0V7R7-F1-model_v4 GT20 1 290 397 659 0.4923 0.7601
AF-A0A385BK92-F1-model_v4 GH0 1 290 8 256 0.4892 0.7999
AF-A0A0P0D298-F1-model_v4 GH0 1 290 8 255 0.4875 0.8
AF-Q6EZE5-F1-model_v4 GT4 4 290 287 571 0.4866 0.6648
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0G9F9S7 GH73 3 290 2 256 0.5972 0.6633
APR83787.1 GH65 1 290 24 314 0.5914 0.94
A0A8K1Y6G1 CBM48 2 290 376 653 0.4954 0.719
E1R5J4 GT4 1 290 8 260 0.4851 0.7859
C0PKY3 GT4 4 290 330 615 0.4842 0.674
ADJ26179.1 GT55 3 290 421 700 0.4837 0.7128
A0A2V3IFV7 GT20 1 289 443 741 0.4715 0.6862
A0A7U6JGT4 GT20 1 290 482 729 0.4651 0.7789
A0A167CI15 GT20 1 288 645 904 0.4584 0.7728
A0A3M6VCS3 GT20 1 290 691 1007 0.457 0.7175
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3l7y-assembly1.cif.gz_A 3 290 1 266 0.7092 0.7572
4bnd-assembly2.cif.gz_A 2 290 1 251 0.7075 0.7846
4bnd-assembly2.cif.gz_B 2 290 1 253 0.707 0.7807
3pgv-assembly4.cif.gz_D 3 290 1 257 0.7042 0.766
6i5x-assembly1.cif.gz_A 2 290 8 260 0.7037 0.7851
3pgv-assembly3.cif.gz_C 3 290 1 258 0.7023 0.7627
3pgv-assembly1.cif.gz_A 4 289 1 259 0.695 0.7533
2i54-assembly1.cif.gz_A 4 290 1 242 0.6943 0.7823
1rlt-assembly4.cif.gz_D 4 290 1 263 0.6918 0.7504
1tj5-assembly1.cif.gz_A 3 290 2 244 0.6903 0.7737
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P42962-F1-model_v4 1 289 5 249 0.7082 0.7945
AF-Q97C22-F1-model_v4 3 289 1 224 0.7021 0.8147
AF-A3CWU5-F1-model_v4 3 290 1 233 0.7003 0.8018
AF-O27143-F1-model_v4 4 290 1 221 0.6979 0.8149
AF-Q54X03-F1-model_v4 3 290 4 248 0.6955 0.785
AF-Q4J8P4-F1-model_v4 3 290 1 223 0.6954 0.8146
AF-Q5JDB7-F1-model_v4 2 290 1 235 0.6951 0.7975
AF-Q9HLQ2-F1-model_v4 3 290 1 224 0.695 0.8073
AF-Q2FU45-F1-model_v4 3 290 1 228 0.6948 0.8081
AF-Q3SZJ9-F1-model_v4 1 290 1 246 0.6941 0.7771
Download Full SwissProt Results