Cluster: Rep_2060_CGC119
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2060
- CGC Family ID: CGCFAM_00021
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2060_c_132 | Rep_2060_c_132_3 | 2887 | 5370 | + | GH38 |
| NULL(UNKNOWN) | Rep_2060_c_132 | Rep_2060_c_132_4 | 5454 | 7661 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2060_c_132 | Rep_2060_c_132_5 | 7768 | 8943 | + | URO-D |
| TC | Rep_2060_c_132 | Rep_2060_c_132_6 | 9194 | 10132 | + | 3.A.1.1.10 |
| TC | Rep_2060_c_132 | Rep_2060_c_132_7 | 10147 | 11031 | + | 3.A.1.1.29 |
Gene ID: Rep_2060_c_132_3
Type: CAZyme
Location: 2887 - 5370 (+)
Type: CAZyme
Location: 2887 - 5370 (+)
Gene ID: Rep_2060_c_132_4
Type:
Location: 5454 - 7661 (+)
Type:
Location: 5454 - 7661 (+)
Gene ID: Rep_2060_c_132_5
Type: pfam
Location: 7768 - 8943 (+)
Type: pfam
Location: 7768 - 8943 (+)
Gene ID: Rep_2060_c_132_6
Type: TC
Location: 9194 - 10132 (+)
Type: TC
Location: 9194 - 10132 (+)
Gene ID: Rep_2060_c_132_7
Type: TC
Location: 10147 - 11031 (+)
Type: TC
Location: 10147 - 11031 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900539655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.