PROTEIN: Rep_2060_c_132_4
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Protein File & Metadata
Source:
Rep_2060_c_132_4.pdb
Genome ID:
Protein ID:
Rep_2060_c_132_4
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Protein Sequence
MEYQIVFKQY DKSTPVLEER WKPDSSKKEQ LKYLEQFPCR IQCIRCDEGS EQRFLLQTEM 60 IHRFEMPISI SLEFIKEEWT GSEYVFMPGA VYDGNRMESK RIPYPPFHAG RSKEGWDRVI 120 TDIPHLDREG KSSGIQLRSG DMSTPAMGYF NQDQREGVLI LANHMVHGRY TGFTISETEH 180 QAVFGISCPA VREERKYFFG ELPDGSGFYP TCEAASDDMG MILREGERVE MEIRCLKFPA 240 ENLYQYFTKF NEMREDLEVG QDFCSIPFSK AHQAVKKKYI HMNFTDEGYF RVGTENDVPP 300 SYWQSGWVGG GMNSYAFLLE DQGLARCQSV SSLKFITEHL QMENGWYIPM YANGQIYGDD 360 FLNKNSPVLL VRKDADLLFF LIKQAIYLKS QGELTVQMES SIARQADAFV RFYQKNRQLG 420 QFINMQKETL IQGDTASAAI VSAALALAYE YFGKPEYLET AEALGVLYRE EYLKKGMMNG 480 GPGEICQAPD SESAFGFLES CVQLYETTGK EEWLQASREA FELAVTWVMS YDFNLPQRST 540 AAKMKAHTRG TVFANAQNKH SAPGICTLSG NSMLKLYRFT GDEKYLKWMS RISHALSQFV 600 SLQERPVDTL AGRALPAGYI NERVQTSDWE GKETIGEFLY GSNWPEVTML LTYVEIPGIY 660 LDLDRKIMQC SDHVNVQIVE HEKEIYLNIF NPTPYDAVVT LMTDHSQDPE PIGHLYFANM 720 KKIEICAGAE INVYI 735
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-U7Q602-F1-model_v4 | 1 | 735 | 60 | 846 | 0.6274 |
0.7139 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJK45749.1 | GH0 | 1 | 735 | 41 | 767 | 0.8984 |
0.9387 |
| A0A268K8D9 | GH182 | 1 | 674 | 26 | 673 | 0.8234 |
0.899 |
| WHP16390.1 | GH182 | 1 | 675 | 23 | 673 | 0.8198 |
0.8916 |
| AF-A0A4Y1VDV5-F1-model_v4 | GH182 | 1 | 718 | 14 | 665 | 0.8092 |
0.8749 |
| AF-A0A109W1T4-F1-model_v4 | GH182 | 1 | 719 | 18 | 657 | 0.8076 |
0.8827 |
| AF-A0A448L4J4-F1-model_v4 | GH182 | 1 | 716 | 23 | 664 | 0.8062 |
0.8831 |
| A0A9E8YN59 | GH182 | 1 | 718 | 19 | 666 | 0.8058 |
0.8778 |
| A0A255SPN4 | GH182 | 1 | 718 | 22 | 665 | 0.8054 |
0.881 |
| AF-F0SA38-F1-model_v4 | GH182 | 1 | 719 | 23 | 670 | 0.8054 |
0.879 |
| AF-A0A7G1I4T0-F1-model_v4 | GH182 | 1 | 716 | 22 | 672 | 0.8048 |
0.8765 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A268K8D9 | GH182 | 1 | 674 | 26 | 673 | 0.8234 |
0.899 |
| WHP16390.1 | GH182 | 1 | 675 | 23 | 673 | 0.8198 |
0.8916 |
| A0A9E8YN59 | GH182 | 1 | 718 | 19 | 666 | 0.8058 |
0.8778 |
| A0A255SPN4 | GH182 | 1 | 718 | 22 | 665 | 0.8054 |
0.881 |
| UJH67547.1 | GH182 | 1 | 717 | 30 | 670 | 0.7923 |
0.8754 |
| A0A139L1L8 | GH182 | 1 | 719 | 49 | 703 | 0.7886 |
0.8716 |
| A0A6I6K1P7 | GH182 | 1 | 676 | 40 | 678 | 0.7727 |
0.86 |
| A0A1U9NH28 | GH182 | 1 | 674 | 46 | 681 | 0.7657 |
0.8578 |
| A0A2S0VPZ6 | GH182 | 1 | 721 | 53 | 721 | 0.7655 |
0.8397 |
| A0A7Z2ZP54 | CBM13 , CBM66 | 1 | 713 | 413 | 1149 | 0.6486 |
0.8173 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly1.cif.gz_A | 1 | 715 | 7 | 668 | 0.5702 |
0.6144 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.