Cluster: Rep_2044_CGC11
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_2044
- CGC Family ID: CGCFAM_03561
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2044_c_1 | Rep_2044_c_1_172 | 177085 | 178026 | - | GT2 |
| NULL(UNKNOWN) | Rep_2044_c_1 | Rep_2044_c_1_173 | 178045 | 179295 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2044_c_1 | Rep_2044_c_1_174 | 179330 | 180706 | - | Big_2 | Big_2 | GDPD |
| TC | Rep_2044_c_1 | Rep_2044_c_1_175 | 180915 | 182450 | - | 2.A.66.1.40 |
| pfam | Rep_2044_c_1 | Rep_2044_c_1_176 | 182460 | 183533 | - | Radical_SAM |
| pfam | Rep_2044_c_1 | Rep_2044_c_1_177 | 183544 | 184566 | - | PS_pyruv_trans |
| CAZyme | Rep_2044_c_1 | Rep_2044_c_1_178 | 184579 | 185610 | - | GT2 |
| CAZyme | Rep_2044_c_1 | Rep_2044_c_1_179 | 185641 | 186615 | - | GT2 |
| NULL(UNKNOWN) | Rep_2044_c_1 | Rep_2044_c_1_180 | 186624 | 187883 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_2044_c_1 | Rep_2044_c_1_181 | 187943 | 188494 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2044_c_1 | Rep_2044_c_1_182 | 188514 | 189539 | - | GT2 |
| pfam | Rep_2044_c_1 | Rep_2044_c_1_183 | 189523 | 190563 | - | Glycos_transf_1 | Glyco_trans_1_4 |
| CAZyme | Rep_2044_c_1 | Rep_2044_c_1_184 | 190582 | 191676 | - | GT4 |
| CAZyme | Rep_2044_c_1 | Rep_2044_c_1_185 | 191681 | 192832 | - | GT4 |
| TC | Rep_2044_c_1 | Rep_2044_c_1_186 | 192851 | 194266 | - | 9.B.18.1.2 |
Gene ID: Rep_2044_c_1_172
Type: CAZyme
Location: 177085 - 178026 (-)
Type: CAZyme
Location: 177085 - 178026 (-)
Gene ID: Rep_2044_c_1_173
Type:
Location: 178045 - 179295 (-)
Type:
Location: 178045 - 179295 (-)
Gene ID: Rep_2044_c_1_174
Type: pfam
Location: 179330 - 180706 (-)
Type: pfam
Location: 179330 - 180706 (-)
Gene ID: Rep_2044_c_1_175
Type: TC
Location: 180915 - 182450 (-)
Type: TC
Location: 180915 - 182450 (-)
Gene ID: Rep_2044_c_1_176
Type: pfam
Location: 182460 - 183533 (-)
Type: pfam
Location: 182460 - 183533 (-)
Gene ID: Rep_2044_c_1_177
Type: pfam
Location: 183544 - 184566 (-)
Type: pfam
Location: 183544 - 184566 (-)
Gene ID: Rep_2044_c_1_178
Type: CAZyme
Location: 184579 - 185610 (-)
Type: CAZyme
Location: 184579 - 185610 (-)
Gene ID: Rep_2044_c_1_179
Type: CAZyme
Location: 185641 - 186615 (-)
Type: CAZyme
Location: 185641 - 186615 (-)
Gene ID: Rep_2044_c_1_180
Type:
Location: 186624 - 187883 (-)
Type:
Location: 186624 - 187883 (-)
Gene ID: Rep_2044_c_1_181
Type:
Location: 187943 - 188494 (-)
Type:
Location: 187943 - 188494 (-)
Gene ID: Rep_2044_c_1_182
Type: CAZyme
Location: 188514 - 189539 (-)
Type: CAZyme
Location: 188514 - 189539 (-)
Gene ID: Rep_2044_c_1_183
Type: pfam
Location: 189523 - 190563 (-)
Type: pfam
Location: 189523 - 190563 (-)
Gene ID: Rep_2044_c_1_184
Type: CAZyme
Location: 190582 - 191676 (-)
Type: CAZyme
Location: 190582 - 191676 (-)
Gene ID: Rep_2044_c_1_185
Type: CAZyme
Location: 191681 - 192832 (-)
Type: CAZyme
Location: 191681 - 192832 (-)
Gene ID: Rep_2044_c_1_186
Type: TC
Location: 192851 - 194266 (-)
Type: TC
Location: 192851 - 194266 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.