PROTEIN: Rep_2044_c_1_173
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Protein File & Metadata
Source:
Rep_2044_c_1_173.pdb
Genome ID:
Protein ID:
Rep_2044_c_1_173
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Protein Sequence
MRSNSKFIIL DTVQSLLIKG FIVVSLLFPM VTLISSRSDA SRAYPEFILS NLVVVMASIF 60 LIIRGVVYKI KTLRYKILFV LVILLTLSYD FFYVKELSYI KWKWNAINIT ISFLFFAILL 120 LFKNKKFFEK YKIINFLILF IVFSNLIGLI LYFKGYMSVE FADWHFNLLP KNFQLYGESR 180 LNWIYFHKSQ YSLMLLLYLS VFVVYKQKFK NMLTYILGIM FLLLCLLLAH TYTAIIGALF 240 IIACSILDLI INNVKSKKIF FGIIPVAAFG GLLINSISKE REILSLGGRV SIWRASIAKI 300 KEIPHGVGLK FRGVWIPLEN GTKVDNCHNI FLNEAFRFSI PVAISYTLLF MVIVLYSLKD 360 KFSFLRLGIW LAVIIQLSMD YSLLATDLSI FLFLIYCIFF LPLSEEDNIN PEEHNK 416
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3H4H7-F1-model_v4 | 2 | 408 | 2 | 389 | 0.7119 |
0.7624 |
| AF-Q9HUG6-F1-model_v4 | 1 | 416 | 5 | 401 | 0.6892 |
0.736 |
| AF-Q9I1M9-F1-model_v4 | 9 | 408 | 39 | 454 | 0.6788 |
0.7694 |
| AF-P27243-F1-model_v4 | 1 | 408 | 9 | 417 | 0.6785 |
0.72 |
| AF-X8F0V5-F1-model_v4 | 9 | 412 | 39 | 467 | 0.6264 |
0.7081 |
| AF-Q5FA54-F1-model_v4 | 7 | 407 | 14 | 428 | 0.5779 |
0.7186 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QSP96058.1 | GT2 | 1 | 414 | 1 | 507 | 0.5827 |
0.7324 |
| AF-B5YD26-F1-model_v4 | GT9 | 2 | 416 | 33 | 496 | 0.5804 |
0.765 |
| AF-G1FG65-F1-model_v4 | GT0 | 7 | 407 | 14 | 428 | 0.5791 |
0.72 |
| AF-Q9K0K0-F1-model_v4 | GT0 | 7 | 407 | 14 | 428 | 0.5787 |
0.7196 |
| AF-E6U9X7-F1-model_v4 | GT0 | 3 | 413 | 1 | 428 | 0.5661 |
0.7569 |
| AF-A0A386XPQ4-F1-model_v4 | GT0 | 1 | 413 | 25 | 455 | 0.5638 |
0.7589 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 6 | 408 | 17 | 447 | 0.5623 |
0.7509 |
| AF-H8L3P3-F1-model_v4 | GT2 | 8 | 416 | 12 | 663 | 0.5604 |
0.7373 |
| UII34295.1 | GT4 | 1 | 408 | 6 | 418 | 0.558 |
0.7468 |
| AF-D5MJ04-F1-model_v4 | GT9 | 1 | 416 | 15 | 549 | 0.5497 |
0.7209 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QSP96058.1 | GT2 | 1 | 414 | 1 | 507 | 0.5827 |
0.7324 |
| B5YD26 | GT9 | 2 | 416 | 33 | 496 | 0.5804 |
0.765 |
| A0A517MXC4 | GT26 | 6 | 408 | 17 | 447 | 0.5623 |
0.7509 |
| H8L3P3 | GT2 | 8 | 416 | 12 | 663 | 0.5604 |
0.7373 |
| UII34295.1 | GT4 | 1 | 408 | 6 | 418 | 0.558 |
0.7468 |
| D5MJ04 | GT9 | 1 | 416 | 15 | 549 | 0.5497 |
0.7209 |
| D9S8K7 | GT4 | 1 | 407 | 3 | 395 | 0.5374 |
0.7458 |
| B8IGI7 | GH16_7 | 9 | 413 | 17 | 462 | 0.5319 |
0.7335 |
| A0A160T1R3 | GH39 | 1 | 411 | 576 | 1043 | 0.525 |
0.7637 |
| A0A7S8IC57 | GH39 | 2 | 409 | 549 | 1041 | 0.5204 |
0.7612 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUG6-F1-model_v4 | 1 | 416 | 5 | 401 | 0.6892 |
0.736 |
| AF-P27243-F1-model_v4 | 1 | 408 | 9 | 417 | 0.6785 |
0.72 |
| AF-Q6F7F9-F1-model_v4 | 2 | 405 | 1 | 404 | 0.6134 |
0.7306 |