Cluster: Rep_2008_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2008
- CGC Family ID: CGCFAM_00957
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2008_c_235 | Rep_2008_c_235_1 | 3 | 389 | - | 3.A.1.11.7 |
| TC | Rep_2008_c_235 | Rep_2008_c_235_2 | 386 | 1231 | - | 3.A.1.11.1 |
| TC | Rep_2008_c_235 | Rep_2008_c_235_3 | 1250 | 2827 | - | 3.A.1.11.8 |
| CAZyme | Rep_2008_c_235 | Rep_2008_c_235_4 | 2897 | 5029 | - | GH36 |
| NULL(UNKNOWN) | Rep_2008_c_235 | Rep_2008_c_235_5 | 5188 | 6687 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2008_c_235 | Rep_2008_c_235_6 | 6800 | 7801 | - | 3.A.1.1.41 |
| TC | Rep_2008_c_235 | Rep_2008_c_235_7 | 7794 | 9065 | - | 3.A.1.1.11 |
Gene ID: Rep_2008_c_235_1
Type: TC
Location: 3 - 389 (-)
Type: TC
Location: 3 - 389 (-)
Gene ID: Rep_2008_c_235_2
Type: TC
Location: 386 - 1231 (-)
Type: TC
Location: 386 - 1231 (-)
Gene ID: Rep_2008_c_235_3
Type: TC
Location: 1250 - 2827 (-)
Type: TC
Location: 1250 - 2827 (-)
Gene ID: Rep_2008_c_235_4
Type: CAZyme
Location: 2897 - 5029 (-)
Type: CAZyme
Location: 2897 - 5029 (-)
Gene ID: Rep_2008_c_235_5
Type:
Location: 5188 - 6687 (-)
Type:
Location: 5188 - 6687 (-)
Gene ID: Rep_2008_c_235_6
Type: TC
Location: 6800 - 7801 (-)
Type: TC
Location: 6800 - 7801 (-)
Gene ID: Rep_2008_c_235_7
Type: TC
Location: 7794 - 9065 (-)
Type: TC
Location: 7794 - 9065 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CANQSA01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.