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PROTEIN: Rep_2008_c_235_5

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Protein File & Metadata
Download PDB File
Source:
Rep_2008_c_235_5.pdb
Genome ID:
Rep_2008
Protein ID:
Rep_2008_c_235_5

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Detailed structural information will appear here after analysis...

Protein Sequence 
MTKFKKFWCL   FLVVVLSASM   FVGCGDDEQS   TTGDTGLVAM   NTTDNITIRY   AYWEDQVIQQ 60
PLAARFHEKY   PNITIEEVYF   ETADGYTAEL   SNLAAAGDLP   DVFWILSAEQ   AIRQGWMADM 120
TAYWENDPDA   RETIPSLDQM   KLGYFYTGKK   FTTPVKYFPT   VAFANKALWE   SKNMEMPDEK 180
NMTWEVFEKE   VEKFHGQLDD   NGKPLYGVSE   AVTVITWYPV   ANDPTCEGEF   GWDGSEFHMQ 240
SWAYGVNLET   KWTNGATIDN   PDSWKTAYKS   SNNIDVDSAV   YEQSDYWAQD   HGKVAFRLDN 300
WWCWDRYWDK   DWMIKENGVI   WVPYVMPHTE   ANKDSVRMMA   TMDFGGISAG   FKYKREAYEW 360
LKYSTWGSEG   WKAKLEIYPT   AYTADGSLFD   KNNCPITTNQ   EVWDGFRAWH   PGADDELGRG 420
KWFDYCIPYF   QKALAIPYGA   QQIPGFEAFL   EESGYRAKEE   AIIASNQQTA   NENVEEFEKI 480
GKENFEQALT   DIKTIYGLE 499
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F2E6-F1-model_v4 9 499 27 442 0.7231 0.8265
AF-P71619-F1-model_v4 15 499 24 436 0.7227 0.8264
AF-K0F8J3-F1-model_v4 44 488 29 435 0.72 0.8339
AF-Q7AQ51-F1-model_v4 45 488 34 445 0.7116 0.8232
AF-O53485-F1-model_v4 45 488 35 439 0.7103 0.8293
AF-A0A133CDW9-F1-model_v4 44 490 43 444 0.7068 0.8362
AF-P76042-F1-model_v4 41 488 24 430 0.7057 0.813
AF-K0EMP7-F1-model_v4 23 490 19 444 0.6961 0.7827
AF-A0A132ZDH4-F1-model_v4 43 483 29 427 0.6939 0.8113
AF-Q8DNU8-F1-model_v4 43 491 38 442 0.6931 0.8124
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 44 490 34 417 0.65 0.7796
A0A0M1Q963 GH43_11 22 490 32 499 0.644 0.7089
A0A9Q8PNJ5 GH4 1 488 225 866 0.534 0.6958
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 488 181 797 0.5289 0.6701
AF-A0A7U1BNH7-F1-model_v4 GH10 43 488 28 421 0.5273 0.7884
AF-A0A1B0VLS2-F1-model_v4 CBM0 42 499 542 954 0.5065 0.799
A0A242CSU4 CBM35 44 499 575 983 0.4992 0.8021
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 44 490 34 417 0.65 0.7796
A0A0M1Q963 GH43_11 22 490 32 499 0.644 0.7089
K8E205 GH32 44 467 34 344 0.5876 0.7732
A0A9Q8PNJ5 GH4 1 488 225 866 0.534 0.6958
A0A1Q2TKJ3 GH49 1 488 181 797 0.5289 0.6701
A0A7U1BNH7 GH10 43 488 28 421 0.5273 0.7884
A0A242CSU4 CBM35 44 499 575 983 0.4992 0.8021
UJP10085.1 GH154 1 466 156 1167 0.4073 0.6427
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4rk2-assembly1.cif.gz_A 45 487 1 393 0.746 0.8489
4mfi-assembly1.cif.gz_A 16 493 1 403 0.739 0.8315
7nbz-assembly2.cif.gz_B 42 485 1 385 0.7357 0.8433
7bvt-assembly1.cif.gz_A 44 488 1 391 0.7338 0.8362
6dtr-assembly1.cif.gz_A 45 487 1 393 0.7334 0.8338
3uor-assembly2.cif.gz_B 45 499 1 395 0.733 0.8329
5z6c-assembly1.cif.gz_A 47 488 1 376 0.7293 0.8454
5ixp-assembly1.cif.gz_A 45 484 1 393 0.7245 0.8251
4gqo-assembly1.cif.gz_A 44 487 1 404 0.719 0.8101
7v09-assembly2.cif.gz_B 43 488 1 403 0.7173 0.8091
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P29822-F1-model_v4 43 487 26 422 0.7059 0.8249
AF-P76042-F1-model_v4 41 488 24 430 0.7057 0.813
AF-Q53684-F1-model_v4 41 497 24 432 0.7009 0.8209
AF-P94528-F1-model_v4 44 487 32 433 0.6987 0.8165
AF-O31518-F1-model_v4 40 487 28 427 0.6913 0.8071
AF-A0QXD9-F1-model_v4 7 487 35 477 0.6891 0.7718
AF-Q8FVS7-F1-model_v4 43 487 23 411 0.687 0.8081
AF-Q578M8-F1-model_v4 43 487 23 411 0.685 0.8059
AF-Q2YKZ9-F1-model_v4 43 487 23 411 0.6831 0.8038
AF-Q9K491-F1-model_v4 25 492 24 425 0.6825 0.7923
Download Full SwissProt Results