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Cluster: Rep_194_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_194_c_3 Rep_194_c_3_198 251735 252952 + GT30
pfam Rep_194_c_3 Rep_194_c_3_199 253369 254460 + Metallophos | Metallophos_2
pfam Rep_194_c_3 Rep_194_c_3_200 254992 256023 - DUF4421
TC Rep_194_c_3 Rep_194_c_3_201 256927 257544 - 1.B.44.2.1
pfam Rep_194_c_3 Rep_194_c_3_202 257658 258689 - GldN
TC Rep_194_c_3 Rep_194_c_3_203 258715 260280 - 9.A.25.1.1
pfam Rep_194_c_3 Rep_194_c_3_204 260371 261249 - GldL_N
TC Rep_194_c_3 Rep_194_c_3_205 261246 262694 - 9.A.25.1.1
Gene ID: Rep_194_c_3_198
Type: CAZyme
Location: 251735 - 252952 (+)
Gene ID: Rep_194_c_3_199
Type: pfam
Location: 253369 - 254460 (+)
Gene ID: Rep_194_c_3_200
Type: pfam
Location: 254992 - 256023 (-)
Gene ID: Rep_194_c_3_201
Type: TC
Location: 256927 - 257544 (-)
Gene ID: Rep_194_c_3_202
Type: pfam
Location: 257658 - 258689 (-)
Gene ID: Rep_194_c_3_203
Type: TC
Location: 258715 - 260280 (-)
Gene ID: Rep_194_c_3_204
Type: pfam
Location: 260371 - 261249 (-)
Gene ID: Rep_194_c_3_205
Type: TC
Location: 261246 - 262694 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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